| Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
| Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
| Canis_familiaris | Canine2 | 473162 | Canine2_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 99.15 | 97.81 | 100.00 | 100.00 | 79.31 | 79.31 | C P | C P | O |
| Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAT | 28.2 | 5449 | C P | C P | O | ||||||||
| Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAT | 73.0 | 3797 | C P | C P | O | ||||||||
| Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAT | 78.5 | 20541 | 79.5 | 20711 | 98.54 | 97.38 | 96.14 | 95.35 | 76.99 | 76.36 | C P | C P | O |
| Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAT | 69.7 | 33960 | 70.9 | 34000 | 98.58 | 96.92 | 95.81 | 95.70 | 73.30 | 73.21 | C P | C P | O |
| Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAT | 69.8 | 33960 | 71.0 | 34000 | 98.58 | 96.92 | 95.81 | 95.70 | 73.30 | 73.21 | C P | C P | O |
| Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAT | 39.6 | 17097 | 40.5 | 17156 | 98.10 | 95.96 | 96.36 | 96.02 | 79.41 | 79.14 | C P | C P | O |
| Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAT | 51.7 | 50844 | 52.9 | 51010 | 98.32 | 96.21 | 95.93 | 95.62 | 74.13 | 73.89 | C P | C P | O |
| Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAT | 71.4 | 22561 | 71.7 | 22395 | 97.56 | 97.28 | 95.14 | 95.84 | 72.04 | 72.58 | C P | C P | O |
| Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAT | 46.1 | 12347 | C P | C P | O | ||||||||
| Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAT | 32.6 | 9019 | C P | C P | O | ||||||||
| Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAT | 18.7 | 5546 | C P | C P | O | ||||||||
| Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAT | 32.5 | 9111 | C P | C P | O | ||||||||
| Homo_sapiens | HTHGU133A | 247719 | HTHGU133A_Hs_VEGAT | 69.8 | 33960 | C P | C P | O | ||||||||
| Homo_sapiens | HTHGU133B | 249453 | HTHGU133B_Hs_VEGAT | 39.6 | 17097 | C P | C P | O | ||||||||
| Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAT | 71.6 | 14526 | C P | C P | O | ||||||||
| Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_VEGAT | 23.8 | 85604 | 24.2 | 84754 | 98.75 | 97.18 | 95.29 | 96.24 | 73.74 | 74.48 | C P | C P | O |
| Homo_sapiens | HuGene10stv1 | 862560 | HuGene10stv1_Hs_VEGAT | 58.3 | 67658 | C P | C P | O | ||||||||
| Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAT | 68.0 | 39080 | 69.3 | 39305 | 98.73 | 96.83 | 96.30 | 95.75 | 80.03 | 79.57 | C P | C P | O |
| Homo_sapiens | TilingChromosome212210A | 333692 | TilingChromosome212210A_Hs_VEGAT | 1.1 | 267 | 1.2 | 258 | 98.24 | 96.56 | 95.88 | 99.22 | 52.81 | 54.65 | C P | C P | O |
| Homo_sapiens | TilingChromosome212210B | 333665 | TilingChromosome212210B_Hs_VEGAT | 5.0 | 1354 | 4.5 | 927 | 87.56 | 95.71 | 65.21 | 95.25 | 34.42 | 50.27 | C P | C P | O |
| Homo_sapiens | TilingChromosome212210C | 334361 | TilingChromosome212210C_Hs_VEGAT | 4.7 | 1115 | 3.7 | 428 | 75.94 | 96.83 | 34.08 | 88.79 | 18.65 | 48.60 | C P | C P | O |
| Homo_sapiens | TilingChromosome212220R | 2243201 | TilingChromosome212220R_Hs_VEGAT | 3.8 | 2733 | 3.3 | 1660 | 84.65 | 96.90 | 58.29 | 95.96 | 21.04 | 34.64 | C P | C P | O |
| Homo_sapiens | TilingENCODE0110 | 790460 | TilingENCODE0110_Hs_VEGAT | 4.9 | 2210 | C P | C P | O | ||||||||
| Homo_sapiens | TilingENCODE20R | 2214280 | TilingENCODE20R_Hs_VEGAT | 5.2 | 2009 | 5.1 | 1977 | 97.45 | 98.04 | 96.07 | 97.62 | 17.47 | 17.75 | C P | C P | O |
| Homo_sapiens | TilingHuman10R01 | 3104980 | TilingHuman10R01_Hs_VEGAT | 3.2 | 5686 | 3.2 | 5703 | 99.09 | 97.84 | 99.02 | 98.72 | 54.54 | 54.37 | C P | C P | O |
| Homo_sapiens | TilingHuman10R02 | 3104956 | TilingHuman10R02_Hs_VEGAT | 1.0 | 820 | 1.0 | 809 | 97.07 | 97.74 | 95.98 | 97.28 | 42.56 | 43.14 | C P | C P | O |
| Homo_sapiens | TilingHuman10R03 | 3104959 | TilingHuman10R03_Hs_VEGAT | 1.7 | 2226 | 1.7 | 2195 | 98.60 | 98.56 | 97.48 | 98.86 | 50.27 | 50.98 | C P | C P | O |
| Homo_sapiens | TilingHuman10R04 | 3104968 | TilingHuman10R04_Hs_VEGAT | 0.9 | 891 | 0.9 | 866 | 97.66 | 98.33 | 95.96 | 98.73 | 41.86 | 43.07 | C P | C P | O |
| Homo_sapiens | TilingHuman10R05 | 3104992 | TilingHuman10R05_Hs_VEGAT | 0.9 | 794 | 0.9 | 729 | 97.96 | 98.25 | 91.06 | 99.18 | 41.06 | 44.72 | C P | C P | O |
| Homo_sapiens | TilingHuman10R06 | 3104962 | TilingHuman10R06_Hs_VEGAT | 1.9 | 3997 | 2.0 | 4343 | 98.70 | 90.06 | 98.30 | 90.47 | 48.14 | 44.30 | C P | C P | O |
| Homo_sapiens | TilingHuman10R07 | 3104969 | TilingHuman10R07_Hs_VEGAT | 1.4 | 2116 | 1.7 | 2787 | 98.03 | 79.14 | 97.12 | 73.74 | 44.71 | 33.94 | C P | C P | O |
| Homo_sapiens | TilingHuman10R08 | 3105007 | TilingHuman10R08_Hs_VEGAT | 2.1 | 3358 | 2.1 | 3390 | 98.63 | 97.19 | 98.90 | 97.96 | 51.40 | 50.91 | C P | C P | O |
| Homo_sapiens | TilingHuman10R09 | 3104992 | TilingHuman10R09_Hs_VEGAT | 1.4 | 2222 | 1.3 | 2181 | 95.53 | 98.33 | 96.35 | 98.17 | 51.49 | 52.45 | C P | C P | O |
| Homo_sapiens | TilingHuman10R10 | 3104992 | TilingHuman10R10_Hs_VEGAT | 2.0 | 3137 | 2.0 | 3113 | 98.60 | 97.72 | 98.15 | 98.91 | 47.24 | 47.61 | C P | C P | O |
| Homo_sapiens | TilingHuman10R11 | 3104964 | TilingHuman10R11_Hs_VEGAT | 2.4 | 4045 | 2.4 | 4059 | 98.47 | 97.17 | 98.32 | 97.98 | 45.17 | 45.01 | C P | C P | O |
| Homo_sapiens | TilingHuman10R12 | 3104966 | TilingHuman10R12_Hs_VEGAT | 2.8 | 5402 | 2.9 | 5393 | 98.46 | 97.52 | 98.02 | 98.18 | 46.37 | 46.45 | C P | C P | O |
| Homo_sapiens | TilingHuman10R13 | 3104957 | TilingHuman10R13_Hs_VEGAT | 3.7 | 6497 | 3.5 | 5412 | 93.71 | 96.95 | 80.96 | 97.19 | 37.77 | 45.34 | C P | C P | O |
| Homo_sapiens | TilingHuman10R14 | 1487440 | TilingHuman10R14_Hs_VEGAT | 2.2 | 1785 | 2.2 | 1762 | 98.77 | 95.98 | 97.87 | 99.15 | 45.27 | 45.86 | C P | C P | O |
| Homo_sapiens | TilingHuman20R01 | 6020961 | TilingHuman20R01_Hs_VEGAT | 2.7 | 10226 | 2.7 | 10290 | 98.92 | 97.52 | 98.86 | 98.24 | 51.92 | 51.59 | C P | C P | O |
| Homo_sapiens | TilingHuman20R02 | 6190329 | TilingHuman20R02_Hs_VEGAT | 2.0 | 5557 | 2.0 | 5513 | 98.13 | 97.08 | 96.63 | 97.41 | 44.29 | 44.64 | C P | C P | O |
| Homo_sapiens | TilingHuman20R03 | 6109114 | TilingHuman20R03_Hs_VEGAT | 2.3 | 7811 | 2.2 | 6762 | 94.71 | 97.23 | 84.66 | 97.80 | 41.02 | 47.38 | C P | C P | O |
| Homo_sapiens | TilingHuman20R04 | 6199162 | TilingHuman20R04_Hs_VEGAT | 1.5 | 4756 | 1.5 | 4762 | 98.46 | 97.53 | 97.69 | 97.56 | 45.19 | 45.13 | C P | C P | O |
| Homo_sapiens | TilingHuman20R05 | 6251118 | TilingHuman20R05_Hs_VEGAT | 1.4 | 3711 | 1.7 | 4689 | 98.19 | 84.09 | 95.66 | 75.71 | 41.17 | 32.59 | C P | C P | O |
| Homo_sapiens | TilingHuman20R06 | 6124067 | TilingHuman20R06_Hs_VEGAT | 1.7 | 5544 | 1.7 | 5499 | 97.37 | 97.80 | 97.06 | 97.85 | 46.27 | 46.64 | C P | C P | O |
| Homo_sapiens | TilingHuman20R07 | 6090639 | TilingHuman20R07_Hs_VEGAT | 2.5 | 9428 | 2.5 | 9494 | 98.33 | 97.13 | 98.32 | 97.64 | 48.72 | 48.38 | C P | C P | O |
| Homo_sapiens | TilingHumanPromoter10R | 4356207 | TilingHumanPromoter10R_Hs_VEGAT | 5.8 | 27645 | 5.9 | 27462 | 97.73 | 95.49 | 95.02 | 95.65 | 64.20 | 64.63 | C P | C P | O |
| Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAT | 50.0 | 48333 | 51.3 | 48516 | 98.25 | 95.91 | 96.05 | 95.69 | 74.70 | 74.41 | C P | C P | O |
| Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAT | 28.4 | 12541 | C P | C P | O | ||||||||
| Mus_musculus | HTMG430A | 249975 | HTMG430A_Mm_VEGAT | 44.2 | 18351 | C P | C P | O | ||||||||
| Mus_musculus | HTMG430B | 248721 | HTMG430B_Mm_VEGAT | 24.5 | 8647 | C P | C P | O | ||||||||
| Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAT | 37.5 | 10802 | 31.6 | 8921 | 82.46 | 97.60 | 81.25 | 98.39 | 62.93 | 76.20 | C P | C P | O |
| Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAT | 35.4 | 8422 | 28.4 | 6677 | 79.29 | 98.80 | 78.77 | 99.36 | 63.89 | 80.59 | C P | C P | O |
| Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAT | 16.7 | 4180 | 12.8 | 3114 | 75.23 | 98.63 | 73.97 | 99.29 | 48.95 | 65.70 | C P | C P | O |
| Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAT | 44.2 | 18351 | 37.0 | 15036 | 82.03 | 97.96 | 80.58 | 98.35 | 69.00 | 84.22 | C P | C P | O |
| Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAT | 24.5 | 8647 | 19.6 | 6845 | 79.18 | 98.95 | 78.47 | 99.12 | 67.41 | 85.16 | C P | C P | O |
| Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_VEGAT | 15.4 | 49478 | 12.9 | 40421 | 82.53 | 98.91 | 81.08 | 99.25 | 68.50 | 83.85 | C P | C P | O |
| Mus_musculus | MoGene10stv1 | 906259 | MoGene10stv1_Mm_VEGAT | 37.0 | 42342 | C P | C P | O | ||||||||
| Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAT | 34.5 | 24890 | 28.4 | 20174 | 81.05 | 98.32 | 79.96 | 98.66 | 67.42 | 83.18 | C P | C P | O |
| Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAT | 44.2 | 18351 | 37.0 | 15036 | 82.03 | 97.96 | 80.58 | 98.35 | 69.00 | 84.22 | C P | C P | O |
| Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAT | 36.9 | 5785 | 31.3 | 4836 | 82.35 | 97.14 | 81.78 | 97.83 | 57.36 | 68.61 | C P | C P | O |
| Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAT | 29.7 | 4851 | 24.9 | 3978 | 81.47 | 97.18 | 80.54 | 98.22 | 47.19 | 57.54 | C P | C P | O |
| Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAT | 38.4 | 19214 | 31.8 | 15581 | 81.24 | 98.06 | 79.70 | 98.29 | 70.68 | 87.16 | C P | C P | O |
| Mus_musculus | TilingMouse11R01 | 3076926 | TilingMouse11R01_Mm_VEGAT | 1.2 | 1559 | 0.9 | 1177 | 73.10 | 98.39 | 74.86 | 99.15 | 41.05 | 54.38 | C P | C P | O |
| Mus_musculus | TilingMouse11R02 | 3161633 | TilingMouse11R02_Mm_VEGAT | 3.0 | 4583 | 3.0 | 4532 | 97.69 | 98.05 | 97.97 | 99.07 | 53.68 | 54.28 | C P | C P | O |
| Mus_musculus | TilingMouse11R03 | 2534803 | TilingMouse11R03_Mm_VEGAT | 1.2 | 1527 | 0.8 | 1102 | 67.31 | 98.12 | 71.05 | 98.46 | 36.74 | 50.91 | C P | C P | O |
| Mus_musculus | TilingMouse11R04 | 2565519 | TilingMouse11R04_Mm_VEGAT | 2.7 | 3370 | 2.6 | 3286 | 95.73 | 97.60 | 95.58 | 98.02 | 53.89 | 55.26 | C P | C P | O |
| Mus_musculus | TilingMouse11R05 | 3153176 | TilingMouse11R05_Mm_VEGAT | 1.5 | 2434 | 1.4 | 2193 | 86.74 | 95.96 | 87.02 | 96.58 | 46.14 | 51.21 | C P | C P | O |
| Mus_musculus | TilingMouse11R06 | 3166201 | TilingMouse11R06_Mm_VEGAT | 1.3 | 1977 | 1.1 | 1696 | 82.80 | 98.23 | 84.93 | 99.00 | 47.14 | 54.95 | C P | C P | O |
| Mus_musculus | TilingMouse11R07 | 3123189 | TilingMouse11R07_Mm_VEGAT | 1.4 | 2514 | 1.0 | 1806 | 67.81 | 97.79 | 71.20 | 99.11 | 40.18 | 55.92 | C P | C P | O |
| Mus_musculus | TilingMouse11R08 | 3050130 | TilingMouse11R08_Mm_VEGAT | 0.7 | 1036 | 0.4 | 727 | 65.85 | 98.01 | 69.11 | 98.49 | 37.84 | 53.92 | C P | C P | O |
| Mus_musculus | TilingMouse11R09 | 3155691 | TilingMouse11R09_Mm_VEGAT | 0.7 | 1034 | 0.4 | 662 | 64.03 | 98.53 | 62.57 | 97.73 | 32.01 | 50.00 | C P | C P | O |
| Mus_musculus | TilingMouse11R10 | 3048063 | TilingMouse11R10_Mm_VEGAT | 0.9 | 1353 | 0.6 | 889 | 66.10 | 98.68 | 65.19 | 99.21 | 36.81 | 56.02 | C P | C P | O |
| Mus_musculus | TilingMouse11R11 | 3167200 | TilingMouse11R11_Mm_VEGAT | 2.7 | 4038 | 2.6 | 3830 | 94.50 | 98.17 | 93.73 | 98.83 | 52.23 | 55.07 | C P | C P | O |
| Mus_musculus | TilingMouse11R12 | 3165843 | TilingMouse11R12_Mm_VEGAT | 0.8 | 1265 | 0.5 | 861 | 64.37 | 97.56 | 66.72 | 98.03 | 37.47 | 55.05 | C P | C P | O |
| Mus_musculus | TilingMouse11R13 | 3083184 | TilingMouse11R13_Mm_VEGAT | 1.0 | 1465 | 0.7 | 964 | 65.05 | 98.68 | 65.12 | 98.96 | 35.70 | 54.25 | C P | C P | O |
| Mus_musculus | TilingMouse11R14 | 3146417 | TilingMouse11R14_Mm_VEGAT | 1.4 | 2406 | 1.0 | 1693 | 67.39 | 98.45 | 69.74 | 99.11 | 39.03 | 55.46 | C P | C P | O |
| Mus_musculus | TilingMouse20R01 | 5888394 | TilingMouse20R01_Mm_VEGAT | 0.9 | 2366 | 0.6 | 1544 | 66.37 | 98.54 | 64.41 | 98.70 | 34.23 | 52.46 | C P | C P | O |
| Mus_musculus | TilingMouse20R02 | 6098981 | TilingMouse20R02_Mm_VEGAT | 2.3 | 6627 | 2.2 | 6388 | 94.67 | 97.38 | 94.72 | 98.26 | 51.12 | 53.04 | C P | C P | O |
| Mus_musculus | TilingMouse20R03 | 5883598 | TilingMouse20R03_Mm_VEGAT | 1.1 | 3577 | 0.8 | 2552 | 67.10 | 98.03 | 70.62 | 98.98 | 38.27 | 53.64 | C P | C P | O |
| Mus_musculus | TilingMouse20R04 | 5865723 | TilingMouse20R04_Mm_VEGAT | 2.6 | 7269 | 2.5 | 6922 | 94.61 | 97.86 | 93.77 | 98.47 | 52.37 | 55.00 | C P | C P | O |
| Mus_musculus | TilingMouse20R05 | 5792498 | TilingMouse20R05_Mm_VEGAT | 1.0 | 2927 | 0.7 | 2017 | 66.00 | 98.49 | 68.09 | 98.81 | 37.62 | 54.59 | C P | C P | O |
| Mus_musculus | TilingMouse20R06 | 5888478 | TilingMouse20R06_Mm_VEGAT | 1.1 | 3166 | 0.8 | 2332 | 72.76 | 98.68 | 73.09 | 99.23 | 40.59 | 55.10 | C P | C P | O |
| Mus_musculus | TilingMouse20R07 | 5669507 | TilingMouse20R07_Mm_VEGAT | 0.7 | 1919 | 0.5 | 1312 | 68.16 | 98.04 | 67.27 | 98.40 | 36.06 | 52.74 | C P | C P | O |
| Mus_musculus | TilingMousePromoter10R | 4369636 | TilingMousePromoter10R_Mm_VEGAT | 3.6 | 16495 | C P | C P | O | ||||||||
| Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAT | 32.1 | 20724 | C P | C P | O | ||||||||
| Sus_scrofa | Porcine | 265635 | Porcine_Ss_VEGAT | 0.7 | 291 | C P | C P | O | ||||||||