| Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
| Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
| Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAE | 51.3 | 2803 | 47.3 | 2260 | 92.09 | 99.69 | 77.81 | 96.50 | 77.38 | 95.97 | C P | C P | O |
| Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAE | 53.4 | 11994 | 49.4 | 9810 | 92.15 | 99.69 | 79.29 | 96.94 | 78.64 | 96.15 | C P | C P | O |
| Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAE | 49.3 | 23695 | 43.2 | 18417 | 87.38 | 99.64 | 75.42 | 97.04 | 72.85 | 93.73 | C P | C P | O |
| Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAE | 49.3 | 23695 | 43.2 | 18417 | 87.38 | 99.64 | 75.42 | 97.04 | 72.85 | 93.73 | C P | C P | O |
| Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAE | 33.0 | 14092 | 25.7 | 9667 | 77.44 | 99.65 | 66.85 | 97.46 | 63.29 | 92.26 | C P | C P | O |
| Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAE | 39.0 | 40006 | 32.1 | 29687 | 82.13 | 99.64 | 72.21 | 97.31 | 67.79 | 91.35 | C P | C P | O |
| Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAE | 53.3 | 15866 | 46.7 | 12408 | 87.29 | 99.72 | 75.78 | 96.91 | 73.40 | 93.85 | C P | C P | O |
| Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAE | 36.9 | 9199 | 30.7 | 6649 | 82.66 | 99.43 | 70.18 | 97.10 | 69.04 | 95.52 | C P | C P | O |
| Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAE | 28.1 | 7395 | 21.9 | 5011 | 77.84 | 99.75 | 65.68 | 96.93 | 63.99 | 94.43 | C P | C P | O |
| Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAE | 17.7 | 5249 | 12.1 | 3189 | 68.09 | 99.68 | 59.57 | 98.06 | 58.51 | 96.30 | C P | C P | O |
| Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAE | 28.8 | 8413 | 20.9 | 5280 | 72.15 | 99.59 | 61.20 | 97.52 | 59.24 | 94.39 | C P | C P | O |
| Homo_sapiens | HTHGU133A | 247719 | HTHGU133A_Hs_VEGAE | 49.3 | 23695 | 43.2 | 18417 | 87.38 | 99.64 | 75.42 | 97.04 | 72.85 | 93.73 | C P | C P | O |
| Homo_sapiens | HTHGU133B | 249453 | HTHGU133B_Hs_VEGAE | 33.0 | 14092 | 25.7 | 9667 | 77.44 | 99.65 | 66.85 | 97.46 | 63.29 | 92.26 | C P | C P | O |
| Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAE | 38.9 | 37319 | C P | C P | O | ||||||||
| Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAE | 51.6 | 10715 | 47.0 | 8564 | 90.67 | 99.65 | 77.47 | 96.93 | 76.48 | 95.69 | C P | C P | O |
| Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_VEGAE | 21.1 | 262014 | 15.9 | 200765 | 75.28 | 99.69 | 74.61 | 97.38 | 62.87 | 82.06 | C P | C P | O |
| Homo_sapiens | HuGene10stv1 | 862560 | HuGene10stv1_Hs_VEGAE | 30.4 | 73447 | 26.6 | 57914 | 87.06 | 99.69 | 76.73 | 97.31 | 75.08 | 95.22 | C P | C P | O |
| Homo_sapiens | HuGene11stv1 | 803480 | HuGene11stv1_Hs_VEGAE | 32.6 | 73409 | C P | C P | O | ||||||||
| Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAE | 1.3 | 154 | C P | C P | O | ||||||||
| Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAE | 1.7 | 5252 | C P | C P | O | ||||||||
| Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAE | 2.2 | 6294 | C P | C P | O | ||||||||
| Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAE | 2.0 | 1322 | C P | C P | O | ||||||||
| Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAE | 1.5 | 1019 | C P | C P | O | ||||||||
| Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAE | 48.7 | 24849 | 42.5 | 19510 | 86.92 | 99.73 | 76.34 | 97.23 | 74.73 | 95.18 | C P | C P | O |
| Homo_sapiens | TilingChromosome212210A | 333692 | TilingChromosome212210A_Hs_VEGAE | 2.6 | 1101 | 1.1 | 482 | 40.68 | 99.94 | 42.14 | 96.27 | 42.14 | 96.27 | C P | C P | O |
| Homo_sapiens | TilingChromosome212210B | 333665 | TilingChromosome212210B_Hs_VEGAE | 8.1 | 3943 | 4.2 | 2055 | 51.06 | 98.49 | 50.49 | 96.89 | 50.37 | 96.64 | C P | C P | O |
| Homo_sapiens | TilingChromosome212210C | 334361 | TilingChromosome212210C_Hs_VEGAE | 8.2 | 4300 | 3.5 | 1783 | 42.63 | 99.19 | 39.49 | 95.23 | 39.33 | 94.84 | C P | C P | O |
| Homo_sapiens | TilingChromosome212220R | 2243201 | TilingChromosome212220R_Hs_VEGAE | 7.4 | 15705 | 3.4 | 7044 | 45.91 | 99.47 | 43.21 | 96.34 | 42.94 | 95.74 | C P | C P | O |
| Homo_sapiens | TilingENCODE0110 | 790460 | TilingENCODE0110_Hs_VEGAE | 9.2 | 9187 | 4.6 | 4754 | 50.13 | 98.77 | 47.84 | 92.45 | 46.64 | 90.13 | C P | C P | O |
| Homo_sapiens | TilingENCODE20R | 2214280 | TilingENCODE20R_Hs_VEGAE | 9.8 | 11060 | 5.0 | 5699 | 50.73 | 98.87 | 47.59 | 92.35 | 47.13 | 91.47 | C P | C P | O |
| Homo_sapiens | TilingHuman10R01 | 3104980 | TilingHuman10R01_Hs_VEGAE | 6.0 | 27669 | 3.0 | 13667 | 49.13 | 99.66 | 48.92 | 99.04 | 48.87 | 98.93 | C P | C P | O |
| Homo_sapiens | TilingHuman10R02 | 3104956 | TilingHuman10R02_Hs_VEGAE | 3.9 | 18189 | 0.8 | 2943 | 21.34 | 99.01 | 14.98 | 92.56 | 14.29 | 88.31 | C P | C P | O |
| Homo_sapiens | TilingHuman10R03 | 3104959 | TilingHuman10R03_Hs_VEGAE | 2.9 | 15660 | 0.6 | 1950 | 19.69 | 99.50 | 10.61 | 85.23 | 9.94 | 79.85 | C P | C P | O |
| Homo_sapiens | TilingHuman10R04 | 3104968 | TilingHuman10R04_Hs_VEGAE | 1.6 | 6309 | 0.5 | 1694 | 31.26 | 99.74 | 26.20 | 97.58 | 26.12 | 97.28 | C P | C P | O |
| Homo_sapiens | TilingHuman10R05 | 3104992 | TilingHuman10R05_Hs_VEGAE | 1.8 | 5491 | 0.8 | 2528 | 44.85 | 99.79 | 45.47 | 98.77 | 45.44 | 98.69 | C P | C P | O |
| Homo_sapiens | TilingHuman10R06 | 3104962 | TilingHuman10R06_Hs_VEGAE | 3.8 | 16061 | 1.6 | 6443 | 42.12 | 99.58 | 38.94 | 97.07 | 38.14 | 95.06 | C P | C P | O |
| Homo_sapiens | TilingHuman10R07 | 3104969 | TilingHuman10R07_Hs_VEGAE | 2.1 | 9443 | 0.3 | 1253 | 16.71 | 99.95 | 11.72 | 88.35 | 11.48 | 86.51 | C P | C P | O |
| Homo_sapiens | TilingHuman10R08 | 3105007 | TilingHuman10R08_Hs_VEGAE | 3.3 | 13926 | 1.7 | 6781 | 50.52 | 99.90 | 47.67 | 97.89 | 47.54 | 97.63 | C P | C P | O |
| Homo_sapiens | TilingHuman10R09 | 3104992 | TilingHuman10R09_Hs_VEGAE | 2.4 | 10309 | 1.1 | 4797 | 44.54 | 99.60 | 45.84 | 98.52 | 45.77 | 98.35 | C P | C P | O |
| Homo_sapiens | TilingHuman10R10 | 3104992 | TilingHuman10R10_Hs_VEGAE | 1.4 | 5520 | 0.7 | 2630 | 48.50 | 99.85 | 47.19 | 99.05 | 46.97 | 98.59 | C P | C P | O |
| Homo_sapiens | TilingHuman10R11 | 3104964 | TilingHuman10R11_Hs_VEGAE | 2.3 | 8715 | 1.0 | 3961 | 45.20 | 99.92 | 44.13 | 97.10 | 44.05 | 96.92 | C P | C P | O |
| Homo_sapiens | TilingHuman10R12 | 3104966 | TilingHuman10R12_Hs_VEGAE | 2.5 | 9825 | 1.2 | 4582 | 47.43 | 98.97 | 46.16 | 98.97 | 46.06 | 98.76 | C P | C P | O |
| Homo_sapiens | TilingHuman10R13 | 3104957 | TilingHuman10R13_Hs_VEGAE | 4.8 | 22008 | 2.2 | 9784 | 45.98 | 99.69 | 43.38 | 97.58 | 43.29 | 97.38 | C P | C P | O |
| Homo_sapiens | TilingHuman10R14 | 1487440 | TilingHuman10R14_Hs_VEGAE | 4.2 | 7772 | 2.0 | 3848 | 48.35 | 99.44 | 48.53 | 98.02 | 48.21 | 97.38 | C P | C P | O |
| Homo_sapiens | TilingHuman20R01 | 6020961 | TilingHuman20R01_Hs_VEGAE | 4.9 | 41708 | 2.4 | 21005 | 49.28 | 99.62 | 49.71 | 98.70 | 48.02 | 95.36 | C P | C P | O |
| Homo_sapiens | TilingHuman20R02 | 6190329 | TilingHuman20R02_Hs_VEGAE | 4.1 | 37639 | 1.2 | 9424 | 29.65 | 99.60 | 23.77 | 94.93 | 21.67 | 86.56 | C P | C P | O |
| Homo_sapiens | TilingHuman20R03 | 6109114 | TilingHuman20R03_Hs_VEGAE | 3.7 | 32537 | 1.4 | 11323 | 37.18 | 99.43 | 33.45 | 96.11 | 31.16 | 89.55 | C P | C P | O |
| Homo_sapiens | TilingHuman20R04 | 6199162 | TilingHuman20R04_Hs_VEGAE | 2.2 | 16251 | 1.1 | 7600 | 47.85 | 99.88 | 46.34 | 99.09 | 42.80 | 91.51 | C P | C P | O |
| Homo_sapiens | TilingHuman20R05 | 6251118 | TilingHuman20R05_Hs_VEGAE | 2.8 | 23026 | 0.9 | 5996 | 29.84 | 99.83 | 24.82 | 95.31 | 22.06 | 84.72 | C P | C P | O |
| Homo_sapiens | TilingHuman20R06 | 6124067 | TilingHuman20R06_Hs_VEGAE | 1.0 | 8033 | 0.4 | 3320 | 40.63 | 99.54 | 40.40 | 97.74 | 33.14 | 80.18 | C P | C P | O |
| Homo_sapiens | TilingHuman20R07 | 6090639 | TilingHuman20R07_Hs_VEGAE | 3.0 | 23910 | 1.5 | 11971 | 48.41 | 99.43 | 49.14 | 98.15 | 46.60 | 93.08 | C P | C P | O |
| Homo_sapiens | TilingHumanPromoter10R | 4356207 | TilingHumanPromoter10R_Hs_VEGAE | 8.6 | 58480 | 3.5 | 22140 | 41.18 | 99.54 | 36.87 | 97.38 | 36.41 | 96.17 | C P | C P | O |
| Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAE | 39.3 | 36454 | 32.4 | 27103 | 82.15 | 99.60 | 72.38 | 97.36 | 68.23 | 91.77 | C P | C P | O |
| Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAE | 20.2 | 11052 | 15.9 | 8006 | 78.76 | 99.71 | 70.67 | 97.56 | 69.64 | 96.14 | C P | C P | O |
| Mus_musculus | HTMG430A | 249975 | HTMG430A_Mm_VEGAE | 42.9 | 20101 | 39.4 | 18262 | 89.02 | 96.93 | 87.18 | 95.96 | 83.47 | 91.88 | C P | C P | O |
| Mus_musculus | HTMG430B | 248721 | HTMG430B_Mm_VEGAE | 26.0 | 9800 | 23.0 | 8534 | 85.76 | 97.17 | 83.64 | 96.05 | 81.23 | 93.29 | C P | C P | O |
| Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAE | 34.0 | 28467 | C P | C P | O | ||||||||
| Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAE | 37.5 | 12179 | 34.5 | 10847 | 89.17 | 96.94 | 85.27 | 95.74 | 83.48 | 93.73 | C P | C P | O |
| Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAE | 38.5 | 10091 | 33.7 | 8414 | 84.32 | 96.47 | 79.93 | 95.86 | 78.14 | 93.71 | C P | C P | O |
| Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAE | 18.7 | 4484 | 16.1 | 3826 | 83.85 | 97.20 | 82.16 | 96.29 | 80.73 | 94.62 | C P | C P | O |
| Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAE | 42.9 | 20101 | 39.4 | 18262 | 89.02 | 96.93 | 87.18 | 95.96 | 83.47 | 91.88 | C P | C P | O |
| Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAE | 26.0 | 9800 | 23.0 | 8534 | 85.76 | 97.17 | 83.64 | 96.05 | 81.23 | 93.29 | C P | C P | O |
| Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_VEGAE | 18.0 | 215103 | 15.2 | 196210 | 81.94 | 96.87 | 87.38 | 95.79 | 75.97 | 83.29 | C P | C P | O |
| Mus_musculus | MoGene10stv1 | 906259 | MoGene10stv1_Mm_VEGAE | 29.0 | 83366 | 26.6 | 76228 | 89.06 | 97.22 | 87.79 | 96.01 | 86.06 | 94.12 | C P | C P | O |
| Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAE | 34.6 | 28467 | 31.3 | 25535 | 87.78 | 97.01 | 86.08 | 95.97 | 82.35 | 91.80 | C P | C P | O |
| Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAE | 42.9 | 20101 | 39.4 | 18262 | 89.02 | 96.93 | 87.18 | 95.96 | 83.47 | 91.88 | C P | C P | O |
| Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAE | 39.9 | 6835 | 34.8 | 5794 | 84.72 | 97.00 | 81.90 | 96.62 | 79.66 | 93.98 | C P | C P | O |
| Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAE | 28.7 | 6219 | 25.8 | 5527 | 87.53 | 97.33 | 85.27 | 95.95 | 83.60 | 94.07 | C P | C P | O |
| Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAE | 37.6 | 20076 | 34.3 | 17899 | 88.59 | 97.01 | 85.67 | 96.09 | 83.70 | 93.88 | C P | C P | O |
| Mus_musculus | TilingMouse11R01 | 3076926 | TilingMouse11R01_Mm_VEGAE | 2.5 | 9285 | 1.1 | 4157 | 43.51 | 99.25 | 44.09 | 98.48 | 35.16 | 78.54 | C P | C P | O |
| Mus_musculus | TilingMouse11R02 | 3161633 | TilingMouse11R02_Mm_VEGAE | 5.6 | 22882 | 2.8 | 11822 | 50.36 | 99.88 | 51.03 | 98.77 | 45.59 | 88.24 | C P | C P | O |
| Mus_musculus | TilingMouse11R03 | 2534803 | TilingMouse11R03_Mm_VEGAE | 2.5 | 7919 | 1.1 | 3579 | 43.80 | 99.69 | 44.27 | 97.96 | 33.97 | 75.16 | C P | C P | O |
| Mus_musculus | TilingMouse11R04 | 2565519 | TilingMouse11R04_Mm_VEGAE | 5.0 | 16510 | 2.5 | 8437 | 49.51 | 99.70 | 50.48 | 98.79 | 44.08 | 86.25 | C P | C P | O |
| Mus_musculus | TilingMouse11R05 | 3153176 | TilingMouse11R05_Mm_VEGAE | 3.0 | 10406 | 1.4 | 5124 | 47.29 | 99.63 | 48.72 | 98.95 | 38.60 | 78.40 | C P | C P | O |
| Mus_musculus | TilingMouse11R06 | 3166201 | TilingMouse11R06_Mm_VEGAE | 2.5 | 10229 | 1.2 | 4942 | 45.95 | 99.60 | 47.88 | 99.11 | 39.83 | 82.44 | C P | C P | O |
| Mus_musculus | TilingMouse11R07 | 3123189 | TilingMouse11R07_Mm_VEGAE | 3.2 | 14614 | 1.3 | 6190 | 40.61 | 99.54 | 41.63 | 98.29 | 35.87 | 84.68 | C P | C P | O |
| Mus_musculus | TilingMouse11R08 | 3050130 | TilingMouse11R08_Mm_VEGAE | 1.8 | 7310 | 0.6 | 2676 | 32.22 | 94.66 | 34.58 | 94.47 | 23.68 | 64.69 | C P | C P | O |
| Mus_musculus | TilingMouse11R09 | 3155691 | TilingMouse11R09_Mm_VEGAE | 1.8 | 8044 | 0.6 | 2691 | 32.87 | 99.55 | 32.93 | 98.44 | 22.70 | 67.86 | C P | C P | O |
| Mus_musculus | TilingMouse11R10 | 3048063 | TilingMouse11R10_Mm_VEGAE | 1.7 | 6773 | 0.8 | 3555 | 37.88 | 79.06 | 40.07 | 76.34 | 28.35 | 54.01 | C P | C P | O |
| Mus_musculus | TilingMouse11R11 | 3167200 | TilingMouse11R11_Mm_VEGAE | 5.1 | 21688 | 2.5 | 10989 | 49.00 | 99.52 | 49.99 | 98.65 | 45.82 | 90.44 | C P | C P | O |
| Mus_musculus | TilingMouse11R12 | 3165843 | TilingMouse11R12_Mm_VEGAE | 1.3 | 5635 | 0.7 | 3160 | 33.19 | 61.00 | 35.24 | 62.85 | 20.64 | 36.80 | C P | C P | O |
| Mus_musculus | TilingMouse11R13 | 3083184 | TilingMouse11R13_Mm_VEGAE | 2.2 | 8318 | 0.9 | 3844 | 43.26 | 99.67 | 45.70 | 98.88 | 36.04 | 77.99 | C P | C P | O |
| Mus_musculus | TilingMouse11R14 | 3146417 | TilingMouse11R14_Mm_VEGAE | 3.0 | 13444 | 1.3 | 6110 | 43.66 | 99.44 | 45.03 | 99.08 | 38.57 | 84.86 | C P | C P | O |
| Mus_musculus | TilingMouse20R01 | 5888394 | TilingMouse20R01_Mm_VEGAE | 2.2 | 17558 | 0.8 | 6563 | 37.62 | 99.43 | 36.82 | 98.49 | 31.84 | 85.19 | C P | C P | O |
| Mus_musculus | TilingMouse20R02 | 6098981 | TilingMouse20R02_Mm_VEGAE | 4.2 | 32052 | 2.1 | 16147 | 49.55 | 99.85 | 49.82 | 98.89 | 45.00 | 89.34 | C P | C P | O |
| Mus_musculus | TilingMouse20R03 | 5883598 | TilingMouse20R03_Mm_VEGAE | 2.5 | 20711 | 1.1 | 8800 | 42.14 | 99.74 | 41.71 | 98.17 | 37.50 | 88.25 | C P | C P | O |
| Mus_musculus | TilingMouse20R04 | 5865723 | TilingMouse20R04_Mm_VEGAE | 4.9 | 39469 | 2.4 | 19225 | 48.31 | 99.63 | 48.12 | 98.80 | 45.05 | 92.48 | C P | C P | O |
| Mus_musculus | TilingMouse20R05 | 5792498 | TilingMouse20R05_Mm_VEGAE | 1.8 | 14738 | 0.9 | 7548 | 41.98 | 83.08 | 43.13 | 84.22 | 37.07 | 72.39 | C P | C P | O |
| Mus_musculus | TilingMouse20R06 | 5888478 | TilingMouse20R06_Mm_VEGAE | 2.5 | 19858 | 1.1 | 8512 | 42.27 | 99.75 | 42.58 | 99.34 | 38.26 | 89.26 | C P | C P | O |
| Mus_musculus | TilingMouse20R07 | 5669507 | TilingMouse20R07_Mm_VEGAE | 1.3 | 10000 | 0.6 | 4882 | 37.20 | 82.49 | 39.00 | 79.89 | 30.62 | 62.72 | C P | C P | O |
| Mus_musculus | TilingMousePromoter10R | 4369636 | TilingMousePromoter10R_Mm_VEGAE | 7.4 | 51038 | 3.4 | 23230 | 44.81 | 96.73 | 43.61 | 95.81 | 41.40 | 90.96 | C P | C P | O |
| Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAE | 32.8 | 21669 | 29.7 | 19274 | 87.76 | 96.97 | 85.51 | 96.13 | 82.05 | 92.24 | C P | C P | O |