2013

  • Translational Bioinformatics Conference/ISCB-Asia 2013
    October 2013
    Seoul, South Korea
    • A Novel Multi-scale Visualization Software for Data-driven Biomedical Data Exploration
      Gang Su, Barbara Mirel, Anuj Kumar, Charles F Burant, Brian Athey, Fan Meng
  • Neuroinformatics 2013
    August 2013
    Stockholm, Sweden
    • PubAnatomy 3D: Integrating Medline Exploration with the Allen Mouse Brain Atlas
      Gary Yang, Manhong Dai, Jean Song, Barbara Mirel, Fan Meng
  • NetBio SIG - ISBM 2013
    July 2013
    Berlin, Germany
    • CoolMap Cytoscape App: Flexible Multi-scale Heatmap Driven Molecular Network Exploration
      Gang Su, Barbara Mirel, Charles Burant, Brian Athey and Fan Meng
  • OpenClinica Global Conference 2013
    June 2013
    Boston, Massachusetts, USA
    • Adapting OpenClinica for International Collaborations
      Andy Lin, Manhong Dai and Fan Meng

    2011

  • APBC 2011
    January 2011
    Inchon, Korea
    • Integrated metabolome and transcriptome analysis of the NCI-60 data set
      Gang Su, Charles F. Burant, Christopher W. Beech, Brian Athey and Fan Meng

    2010

  • InCoB'10
    September 2010
    Tokyo, Japan
    • NGSQC: Cross-Platform Quality Analysis Pipeline for Deep Sequencing Data
      Manhong Dai, Robert Thompson, Christopher Maher, Rafael Contreras, David Markovitz, Gil Omenn and Fan Meng

    2009

  • International Joint Conference on Bioinformatics, System Biology and Intelligent Computing
    August 2009
    Shanghai, China
    • Cross-Domain Neurobiology Data Integration and Exploration
      W. Xuan, M. Dai, J. Buckner, B. Mirel, J. Song, H. Dong, B. Athey, S. J. Watson and F. Meng
  • ISMB 2009 SIG Meetings
    June 2009
    Stockholm, Sweden
    • Integrated Literature and Data Exploration Using Interactive Brain Maps (BioLink SIG)
      W. Xuan, M. Dai, J. Buckner, B. Mirel, J. Song, H. Dong, M. Bota, B. Athey, H. Akil, W. Stanley and F. Meng
    • Enabling GPU Computing in the R Statistical Environment (Binformatics Open Source Conference SIG)
      Josh Buckner, Manhong Dai, Brian Athey, Stanley Watson and Fan Meng

    2008

  • ISMB 2008 SIG meetings
    July 2008
    Toronto, Ontario, Canada
    • PubOnto: Open Biomedical Ontology-Based Medline Exploration (Bio-Ontologies SIG)
      W. Xuan, M. Dai, B. Athey, S. J. Watson, F. Meng
    • PASS: A Fast Algorithm for Illumina/SOLiD Sequence Alignment with Guaranteed Recall (Next Generation Sequencing SIG)
      Manhong Dai, Justin Wilson, Stanley Watson and Fan Meng
    • Detecting Alternative Splicing in Deep Sequencing Data (Alternative Splicing AS-SIG)
      Manhong Dai, Justin Wilson, Huda Akil, Stanley Watson and Fan Meng
    • Use the Make Utility for the Maintenance of Complex Bioinformatics Pipelines (BOSC SIG Lightning Talk)
      Justin Wilson, Manhong Dai, Stanley Watson and Fan Meng
  • Summit on Translational Bioinformatics
    March 2008
    San Francisco, California, USA
    • A Diagram Editor for Efficient Biomedical Knowledge Capture and Integration
      B. Yu; E. Jakupovic; J. Wilson; M. Dai; W. Xuan; B. Mirel; B. Athey; S.J. Watson; F. Meng

    2007

  • Computational Systems Bioinformatics Conference
    August 2007
    San Diego, California, USA
    • An Active Visual Search Interface for Medline
      W. Xuan, M. Dai, B. Mirel, J. Wilson, B. Athey, S. J. Watson, F. Meng
  • BioLink 2007: Linking Literature, Information and Knowledge for Biology
    July 2007
    Vienna, Austria
    • Interactive Medline Search Engine Utilizing Biomedical Concepts and Data Integration
      W. Xuan, M. Dai, B. Mirel, J Wilson, B Athey, S. J. Watson, F. Meng
  • Conference on Intelligent Text Processing and Computational Linguistics
    February 2007
    Mexico City, Mexico
    • Tagging Sentence Boundaries in Biomedical Literature
      Weijian Xuan, Pinglang Wang, Stanley J. Watson and Fan Meng

    2006

  • International Conference on Intelligent Systems for Molecular Biology 2006
    August 2006
    Fortaleza, Brazil
    • SNP Function Portal: a web database for exploring the function implication of SNP alleles
      Pinglang Wang, Manhong Dai, Weijian Xuan, Richard C McEachin, Anne U Jackson, Laura J Scott, Brian Athey, Stanley J Watson, Fan Meng
    • Knowledge-Based Analysis of Genome-Wide SNP Scanning Data (Public Library of Science sponsored talk)
      Manhong Dai, Weijian Xuan, Huda Akil, Stanley J. Watson, Fan Meng
    • Informatics Issues in Affymetrix Human Exon Array Data Analysis (Alternative Splicing AS-SIG)
      Manhong Dai, Haiming Chen, Margit Burmeister; Melvin McInnis, Marquis Vawter, Stanley Watson, Fan Meng
    • Biological Concept Diagram Editor for Knowledge Capture and Sharing (software demo)
      Bohua Yu, Elvis Jakupovic, Manhong Dai, Stanley J. Watson, Fan Meng
    • Web-Based GeneChip Analysis System (software demo)
      Manhong Dai, Pinglang Wang, Elvis Jakupovic, Stanley J. Watson and Fan Meng
    • Genetic Marker search engine for the Medline database (software demo)
      Weijian Xuan, Pinglang Wang, Stanley J. Watson and Fan Meng

    2005

  • International Conference on Mathematics and Engineering Techniques in Medicine and Biological Sciences 2005
    May 2005
    Las Vegas, Nevada, USA
    • A Database-Linked Diagram Editor for Biological Concepts
      B. Yu, M. Dai, S.J. Watson, and F. Meng

    2004

  • International Conference on Bioinformatics and its Applications 2004
    December 2004
    Fort Lauderdale, Florida, USA
    • Gene definition in different databases and its implication in microarray data interpretation.
      P. Wang, M. Dai, R.Thompson, S.J. Watson and F. Meng
    • Exploring important issues in the implementation of Gene Set Enrichment Analysis.
      Y. Wang, S. J. Watson and F. Meng
    • Screening potential Allele-frequency disequilibrium in data from Affymetrix gene expression arrays.
      M. Dai, Y. Wang, E. Sliwerska, M. Burmeister, S. J. Watson, H. Akil and F. Meng