Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENSG | 35.6 | 8247 | 37.9 | 8440 | 99.52 | 93.46 | 99.81 | 97.52 | 82.45 | 80.57 | C P | C P | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENSG | 79.4 | 17333 | 80.4 | 17430 | 98.83 | 97.56 | 99.28 | 98.73 | 92.60 | 92.09 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENSG | 45.3 | 16162 | 46.4 | 16356 | 99.71 | 97.44 | 99.80 | 98.62 | 88.71 | 87.66 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENSG | 44.1 | 16162 | C P | C P | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENSG | 54.9 | 8602 | 42.0 | 6826 | 68.71 | 89.74 | 72.59 | 91.47 | 45.33 | 57.12 | C P | C P | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENSG | 89.5 | 11518 | 90.6 | 11523 | 98.38 | 97.16 | 97.48 | 97.44 | 89.62 | 89.58 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENSG | 69.0 | 12462 | 68.2 | 12436 | 97.33 | 98.53 | 97.04 | 97.24 | 88.28 | 88.47 | C P | C P | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENSG | 37.3 | 11818 | 39.4 | 11965 | 99.05 | 93.71 | 99.53 | 98.30 | 83.76 | 82.73 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENSG | 69.8 | 1254 | 70.9 | 1261 | 97.11 | 95.59 | 98.01 | 97.46 | 72.25 | 71.85 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENSG | 76.0 | 7584 | 77.2 | 7626 | 97.06 | 95.61 | 97.96 | 97.42 | 77.76 | 77.33 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENSG | 68.8 | 11801 | 70.9 | 11853 | 96.09 | 93.14 | 97.98 | 97.55 | 68.51 | 68.21 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENSG | 68.8 | 11800 | 70.9 | 11852 | 96.09 | 93.14 | 97.98 | 97.55 | 68.52 | 68.22 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENSG | 44.1 | 8012 | 47.8 | 8370 | 93.59 | 86.40 | 95.51 | 91.42 | 66.58 | 63.73 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENSG | 54.1 | 18919 | 56.4 | 19002 | 94.60 | 90.60 | 97.38 | 96.96 | 61.34 | 61.07 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENSG | 75.6 | 17617 | 75.1 | 17639 | 96.19 | 96.89 | 98.50 | 98.38 | 73.49 | 73.39 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENSG | 70.7 | 8116 | 73.4 | 8140 | 96.25 | 92.71 | 97.46 | 97.17 | 70.66 | 70.45 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENSG | 70.7 | 8117 | 73.4 | 8139 | 96.24 | 92.71 | 97.45 | 97.19 | 70.64 | 70.45 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENSG | 50.8 | 5633 | 52.3 | 5730 | 94.63 | 91.87 | 95.74 | 94.12 | 74.54 | 73.28 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENSG | 36.6 | 4305 | 39.3 | 4545 | 92.93 | 86.60 | 94.66 | 89.66 | 70.31 | 66.60 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENSG | 22.5 | 3015 | 25.3 | 3366 | 91.99 | 81.82 | 93.37 | 83.63 | 70.32 | 62.98 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENSG | 36.1 | 4259 | 41.2 | 4675 | 93.31 | 81.80 | 94.86 | 86.42 | 68.30 | 62.22 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENSG | 68.8 | 11800 | 70.9 | 11852 | 96.09 | 93.14 | 97.98 | 97.55 | 68.52 | 68.22 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENSG | 44.0 | 8011 | 47.7 | 8369 | 93.59 | 86.40 | 95.51 | 91.42 | 66.58 | 63.74 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENSG | 54.7 | 18807 | 56.9 | 18875 | 94.76 | 91.06 | 97.30 | 96.95 | 63.24 | 63.01 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENSG | 69.6 | 5003 | 70.8 | 5055 | 96.65 | 94.97 | 98.04 | 97.03 | 66.34 | 65.66 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENSG | 27.4 | 35317 | 29.5 | 35285 | 94.48 | 87.93 | 94.99 | 95.07 | 32.82 | 32.85 | C P | C P | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_ENSG | 78.2 | 22732 | 78.9 | 23021 | 97.33 | 96.52 | 99.09 | 97.85 | 66.50 | 65.66 | C P | C P | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_ENSG | 76.7 | 22704 | 77.3 | 22984 | 97.33 | 96.53 | 99.09 | 97.89 | 66.47 | 65.66 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENSG | 0.5 | 190 | 1.8 | 183 | 92.97 | 25.67 | 93.68 | 97.27 | 0.00 | 0.00 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENSG | 0.6 | 3612 | 2.4 | 4681 | 91.50 | 22.27 | 92.17 | 71.12 | 0.28 | 0.21 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENSG | 0.8 | 4424 | 3.0 | 5320 | 90.22 | 23.30 | 91.59 | 76.17 | 0.38 | 0.32 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENSG | 0.7 | 1338 | 2.8 | 1306 | 91.20 | 24.37 | 91.78 | 94.03 | 0.00 | 0.00 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENSG | 0.6 | 1097 | 2.1 | 1059 | 90.51 | 24.55 | 91.43 | 94.71 | 0.00 | 0.00 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENSG | 71.1 | 17184 | 71.7 | 17101 | 96.11 | 95.30 | 97.37 | 97.84 | 77.72 | 78.10 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENSG | 52.8 | 18797 | 55.1 | 18801 | 94.46 | 90.55 | 97.00 | 96.98 | 62.67 | 62.66 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENSG | 30.0 | 5634 | 31.2 | 5838 | 96.10 | 92.41 | 96.73 | 93.35 | 76.71 | 74.03 | C P | C P | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENSG | 34.9 | 13484 | 36.1 | 13631 | 99.40 | 96.34 | 99.77 | 98.69 | 81.74 | 80.86 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENSG | 72.5 | 12155 | 70.6 | 12016 | 92.62 | 95.11 | 96.38 | 97.50 | 72.88 | 73.73 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENSG | 41.4 | 7464 | 38.6 | 7109 | 86.57 | 92.72 | 89.52 | 93.99 | 70.10 | 73.60 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENSG | 56.2 | 17144 | 53.9 | 16860 | 90.42 | 94.25 | 95.14 | 96.74 | 68.61 | 69.77 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENSG | 62.5 | 7825 | 61.5 | 7767 | 92.82 | 94.32 | 94.90 | 95.61 | 74.02 | 74.57 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENSG | 59.2 | 6472 | 58.0 | 6368 | 88.99 | 90.83 | 91.97 | 93.47 | 71.15 | 72.31 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENSG | 28.0 | 3670 | 27.1 | 3533 | 86.79 | 89.61 | 88.20 | 91.62 | 75.34 | 78.26 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENSG | 72.6 | 12155 | 70.7 | 12016 | 92.62 | 95.11 | 96.38 | 97.50 | 72.88 | 73.73 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENSG | 41.4 | 7464 | 38.7 | 7109 | 86.57 | 92.72 | 89.52 | 93.99 | 70.10 | 73.60 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENSG | 26.2 | 26003 | 27.3 | 25949 | 93.05 | 89.34 | 94.28 | 94.47 | 26.77 | 26.83 | C P | C P | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_ENSG | 76.6 | 22308 | 77.2 | 22868 | 94.90 | 94.21 | 97.49 | 95.10 | 57.84 | 56.42 | C P | C P | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_ENSG | 75.6 | 22304 | 76.1 | 22861 | 94.90 | 94.21 | 97.49 | 95.11 | 57.83 | 56.42 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENSG | 57.2 | 17144 | 54.9 | 16860 | 90.42 | 94.25 | 95.14 | 96.74 | 68.61 | 69.77 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENSG | 72.6 | 12155 | 70.7 | 12016 | 92.62 | 95.11 | 96.38 | 97.50 | 72.88 | 73.73 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENSG | 62.6 | 4334 | 64.5 | 4492 | 92.64 | 89.99 | 94.60 | 91.27 | 69.45 | 67.01 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENSG | 47.1 | 2842 | 49.5 | 2953 | 95.70 | 91.03 | 96.59 | 92.96 | 70.62 | 67.96 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENSG | 66.7 | 16679 | 64.6 | 16291 | 92.00 | 95.00 | 93.58 | 95.81 | 78.58 | 80.46 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENSG | 53.7 | 17186 | 51.0 | 16456 | 89.51 | 94.23 | 92.23 | 96.32 | 74.67 | 77.98 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENSG | 36.8 | 11187 | 39.5 | 11462 | 99.44 | 92.58 | 99.65 | 97.26 | 78.27 | 76.39 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENSG | 46.8 | 10955 | 49.4 | 11142 | 99.43 | 94.11 | 99.63 | 97.95 | 79.86 | 78.52 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENSG | 49.8 | 8292 | 52.8 | 8497 | 99.39 | 93.70 | 99.65 | 97.25 | 80.41 | 78.47 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENSG | 25.0 | 3870 | 27.5 | 4126 | 99.55 | 90.52 | 99.64 | 93.46 | 81.89 | 76.81 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENSG | 52.1 | 4104 | 55.7 | 4250 | 99.50 | 93.09 | 99.63 | 96.21 | 75.49 | 72.89 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENSG | 30.5 | 2896 | 35.4 | 3232 | 98.93 | 85.19 | 99.31 | 88.99 | 76.73 | 68.75 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENSG | 33.1 | 3233 | 37.7 | 3559 | 99.29 | 86.99 | 99.57 | 90.45 | 76.43 | 69.43 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENSG | 64.4 | 696 | 66.6 | 707 | 99.31 | 96.08 | 99.71 | 98.16 | 81.18 | 79.92 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENSG | 53.7 | 502 | 57.1 | 518 | 99.24 | 93.36 | 99.20 | 96.14 | 67.93 | 65.83 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENSG | 21.2 | 21794 | 22.2 | 22183 | 99.74 | 95.46 | 99.83 | 98.08 | 57.27 | 56.27 | C P | C P | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_ENSG | 73.4 | 23109 | 75.2 | 23303 | 99.44 | 96.97 | 99.77 | 98.94 | 75.43 | 74.81 | C P | C P | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_ENSG | 72.3 | 23105 | 74.2 | 23298 | 99.43 | 96.97 | 99.77 | 98.95 | 75.43 | 74.80 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENSG | 37.7 | 11187 | 40.5 | 11462 | 99.44 | 92.58 | 99.65 | 97.26 | 78.27 | 76.39 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENSG | 49.3 | 1257 | 50.9 | 1286 | 99.83 | 96.52 | 100.00 | 97.74 | 86.63 | 84.68 | C P | C P | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENSG | 74.4 | 6135 | 72.4 | 5926 | 93.55 | 96.25 | 96.20 | 99.60 | 87.01 | 90.08 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENSG | 51.1 | 5571 | 49.9 | 5527 | 97.59 | 99.86 | 99.08 | 99.87 | 94.96 | 95.71 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENSG | 18.0 | 4636 | 20.0 | 4834 | 99.58 | 89.76 | 99.81 | 95.72 | 82.74 | 79.35 | C P | C P | O |