Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENST | 40.9 | 10771 | 41.5 | 10870 | 100.00 | 98.52 | 99.91 | 99.00 | 89.69 | 88.88 | C P | C P | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENST | 88.1 | 26373 | 88.6 | 24834 | 99.88 | 99.35 | 88.75 | 94.25 | 84.63 | 89.88 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENST | 52.6 | 21760 | 53.1 | 21839 | 99.77 | 98.69 | 99.43 | 99.08 | 90.06 | 89.73 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENST | 51.2 | 21760 | C P | C P | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENST | 59.4 | 14128 | 45.0 | 8615 | 71.52 | 94.44 | 51.78 | 84.92 | 38.05 | 62.39 | C P | C P | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENST | 92.8 | 19278 | 92.9 | 18537 | 99.87 | 99.70 | 92.08 | 95.77 | 90.53 | 94.15 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENST | 74.6 | 20808 | 75.3 | 20166 | 99.76 | 98.88 | 91.80 | 94.72 | 89.85 | 92.71 | C P | C P | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENST | 43.5 | 16547 | 43.5 | 16552 | 99.99 | 99.81 | 99.85 | 99.82 | 96.86 | 96.83 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENST | 78.6 | 5656 | 80.3 | 5277 | 99.83 | 97.76 | 91.25 | 97.80 | 76.06 | 81.52 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENST | 84.5 | 30772 | 86.4 | 29343 | 99.70 | 97.59 | 92.80 | 97.32 | 79.77 | 83.66 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENST | 76.2 | 51891 | 77.7 | 49028 | 99.40 | 97.52 | 92.15 | 97.53 | 76.17 | 80.62 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENST | 76.3 | 51891 | 77.7 | 49028 | 99.40 | 97.52 | 92.15 | 97.53 | 76.17 | 80.62 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENST | 47.6 | 26069 | 47.3 | 24554 | 96.91 | 97.58 | 91.85 | 97.52 | 79.90 | 84.83 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENST | 59.0 | 77834 | 59.1 | 73063 | 97.85 | 97.63 | 91.74 | 97.73 | 76.30 | 81.28 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENST | 84.0 | 82342 | 84.9 | 76655 | 99.15 | 98.17 | 91.47 | 98.26 | 77.12 | 82.85 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENST | 77.7 | 34437 | 79.1 | 32823 | 99.44 | 97.62 | 92.83 | 97.40 | 75.75 | 79.47 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENST | 77.7 | 34403 | 79.1 | 32800 | 99.44 | 97.62 | 92.85 | 97.39 | 75.74 | 79.45 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENST | 54.3 | 18547 | 54.1 | 17483 | 97.51 | 97.94 | 92.27 | 97.89 | 79.75 | 84.61 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENST | 39.7 | 13955 | 39.3 | 13082 | 96.53 | 97.54 | 91.24 | 97.33 | 76.57 | 81.68 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENST | 24.5 | 9286 | 23.7 | 8641 | 94.69 | 97.68 | 90.52 | 97.28 | 79.19 | 85.11 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENST | 39.2 | 14558 | 38.8 | 13503 | 96.76 | 97.73 | 90.45 | 97.52 | 77.79 | 83.87 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENST | 76.3 | 51891 | 77.7 | 49028 | 99.40 | 97.52 | 92.15 | 97.53 | 76.17 | 80.62 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENST | 47.5 | 26069 | 47.2 | 24554 | 96.91 | 97.58 | 91.85 | 97.52 | 79.90 | 84.83 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENST | 59.6 | 76575 | 59.8 | 72013 | 97.99 | 97.66 | 91.87 | 97.69 | 77.46 | 82.36 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENST | 77.1 | 22732 | 78.8 | 21707 | 99.62 | 97.40 | 92.82 | 97.20 | 73.08 | 76.53 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENST | 28.7 | 144964 | 28.4 | 131374 | 96.73 | 97.89 | 88.69 | 97.86 | 66.83 | 73.75 | C P | C P | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_ENST | 73.3 | 115707 | 74.2 | 105342 | 99.29 | 98.11 | 89.27 | 98.06 | 74.66 | 82.00 | C P | C P | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_ENST | 71.9 | 115694 | 72.7 | 105327 | 99.29 | 98.12 | 89.27 | 98.06 | 74.66 | 82.01 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENST | 0.5 | 416 | 0.5 | 390 | 95.42 | 98.58 | 92.31 | 98.46 | 91.83 | 97.95 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENST | 0.6 | 9112 | 0.6 | 8598 | 93.74 | 97.74 | 91.45 | 96.92 | 89.30 | 94.64 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENST | 0.8 | 12007 | 0.8 | 11362 | 93.26 | 97.58 | 90.91 | 96.07 | 88.40 | 93.42 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENST | 0.8 | 3316 | 0.7 | 3106 | 94.06 | 97.93 | 90.95 | 97.10 | 88.27 | 94.24 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENST | 0.6 | 2489 | 0.6 | 2402 | 93.64 | 97.14 | 89.88 | 93.13 | 87.51 | 90.67 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENST | 78.4 | 59371 | 79.5 | 56680 | 99.15 | 97.72 | 92.98 | 97.39 | 80.35 | 84.17 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENST | 57.1 | 72824 | 57.3 | 68635 | 97.76 | 97.46 | 92.22 | 97.85 | 76.75 | 81.43 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENST | 34.3 | 21130 | 34.6 | 19900 | 98.91 | 97.99 | 91.77 | 97.44 | 80.24 | 85.20 | C P | C P | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENST | 36.8 | 23864 | 37.5 | 24048 | 100.00 | 98.24 | 99.93 | 99.16 | 86.58 | 85.92 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENST | 77.8 | 33273 | 76.6 | 30210 | 95.66 | 97.19 | 84.75 | 93.34 | 71.38 | 78.62 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENST | 41.9 | 15855 | 39.5 | 14357 | 89.36 | 94.88 | 81.65 | 90.17 | 71.77 | 79.26 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENST | 59.1 | 45043 | 57.2 | 41115 | 93.46 | 96.42 | 84.36 | 92.42 | 70.50 | 77.23 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENST | 67.4 | 19825 | 66.4 | 17974 | 95.52 | 96.85 | 84.40 | 93.10 | 69.98 | 77.19 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENST | 61.8 | 15480 | 58.6 | 13890 | 91.85 | 96.93 | 83.15 | 92.67 | 71.23 | 79.38 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENST | 28.3 | 7568 | 26.5 | 6764 | 89.36 | 95.42 | 80.71 | 90.30 | 73.65 | 82.41 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENST | 77.9 | 33273 | 76.7 | 30210 | 95.66 | 97.19 | 84.75 | 93.34 | 71.38 | 78.62 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENST | 42.0 | 15855 | 39.5 | 14357 | 89.36 | 94.88 | 81.65 | 90.17 | 71.77 | 79.26 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENST | 26.3 | 80250 | 25.8 | 74007 | 95.06 | 96.80 | 85.30 | 92.50 | 63.88 | 69.27 | C P | C P | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_ENST | 75.6 | 72107 | 77.6 | 66612 | 96.89 | 94.32 | 85.51 | 92.56 | 67.36 | 72.92 | C P | C P | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_ENST | 74.5 | 72103 | 76.6 | 66612 | 96.89 | 94.31 | 85.51 | 92.55 | 67.36 | 72.92 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENST | 60.1 | 45043 | 58.3 | 41115 | 93.46 | 96.42 | 84.36 | 92.42 | 70.50 | 77.23 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENST | 77.9 | 33273 | 76.7 | 30210 | 95.66 | 97.19 | 84.75 | 93.34 | 71.38 | 78.62 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENST | 66.6 | 10742 | 65.7 | 9688 | 95.46 | 96.65 | 83.61 | 92.70 | 66.29 | 73.50 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENST | 53.7 | 8443 | 54.2 | 7684 | 97.94 | 97.08 | 84.88 | 93.26 | 67.61 | 74.28 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENST | 70.6 | 36596 | 69.8 | 33518 | 94.74 | 95.85 | 83.65 | 91.34 | 73.68 | 80.44 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENST | 55.3 | 37862 | 53.5 | 34589 | 92.75 | 95.83 | 83.97 | 91.91 | 75.85 | 83.02 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENST | 39.5 | 17001 | 40.2 | 17123 | 100.00 | 98.44 | 99.94 | 99.23 | 90.39 | 89.74 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENST | 50.4 | 16689 | 51.2 | 16811 | 100.00 | 98.42 | 99.94 | 99.21 | 90.47 | 89.81 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENST | 53.6 | 12693 | 54.6 | 12807 | 100.00 | 98.18 | 99.95 | 99.06 | 90.14 | 89.33 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENST | 26.8 | 5752 | 27.1 | 5785 | 100.00 | 98.90 | 99.93 | 99.36 | 92.72 | 92.19 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENST | 57.3 | 6574 | 58.5 | 6655 | 100.00 | 97.94 | 99.97 | 98.75 | 86.57 | 85.51 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENST | 32.3 | 4247 | 32.9 | 4284 | 100.00 | 98.43 | 100.00 | 99.14 | 89.12 | 88.35 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENST | 35.4 | 4722 | 36.1 | 4767 | 100.00 | 98.00 | 99.96 | 99.01 | 86.55 | 85.74 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENST | 70.3 | 1249 | 71.0 | 1253 | 100.00 | 98.98 | 99.92 | 99.60 | 92.23 | 91.94 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENST | 59.3 | 739 | 61.6 | 747 | 99.99 | 96.33 | 99.73 | 98.66 | 75.37 | 74.56 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENST | 21.5 | 31785 | 21.9 | 32454 | 100.00 | 98.46 | 100.00 | 97.94 | 81.45 | 79.77 | C P | C P | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_ENST | 71.6 | 32037 | 73.7 | 32444 | 100.00 | 97.18 | 100.00 | 98.75 | 80.99 | 79.97 | C P | C P | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_ENST | 70.6 | 32034 | 72.7 | 32439 | 100.00 | 97.18 | 100.00 | 98.75 | 80.99 | 79.98 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENST | 40.6 | 17001 | 41.2 | 17123 | 100.00 | 98.44 | 99.94 | 99.23 | 90.39 | 89.74 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENST | 53.2 | 1869 | 54.1 | 1882 | 100.00 | 98.42 | 99.95 | 99.26 | 92.35 | 91.71 | C P | C P | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENST | 75.3 | 6171 | 74.5 | 6111 | 98.70 | 99.75 | 98.59 | 99.56 | 97.00 | 97.95 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENST | 51.4 | 5609 | 51.4 | 5613 | 100.00 | 99.87 | 99.95 | 99.88 | 99.34 | 99.27 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENST | 21.1 | 5484 | 21.3 | 5506 | 100.00 | 98.85 | 99.96 | 99.56 | 92.03 | 91.66 | C P | C P | O |