Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Anopheles_gambiae | PlasmodiumAnopheles | 250758 | PlasmodiumAnopheles_Ag_ENTREZG | 1.7 | 408 | 1.7 | 408 | 100.00 | 99.81 | 100.00 | 100.00 | 99.26 | 99.26 | C P | C P | O |
Arabidopsis_thaliana | AG | 131822 | AG_At_ENTREZG | 83.1 | 7352 | 84.1 | 7364 | 100.00 | 98.89 | 100.00 | 99.84 | 90.08 | 89.94 | C P | C P | O |
Arabidopsis_thaliana | AGRONOMICS1 | 6046951 | AGRONOMICS1_At_ENTREZG | 19.7 | 30749 | 19.9 | 30797 | 100.00 | 99.24 | 100.00 | 99.84 | 79.78 | 79.66 | C P | C P | O |
Arabidopsis_thaliana | ATH1121501 | 251078 | ATH1121501_At_ENTREZG | 84.9 | 21225 | 85.3 | 21264 | 100.00 | 99.49 | 100.00 | 99.82 | 96.73 | 96.55 | C P | C P | O |
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENTREZG | 43.0 | 9403 | 43.9 | 9537 | 95.64 | 93.62 | 95.84 | 94.50 | 80.40 | 79.27 | C P A | C P A | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENTREZG | 78.9 | 17198 | 79.3 | 17255 | 100.00 | 99.52 | 100.00 | 99.67 | 97.01 | 96.69 | C P A | C P A | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENTREZG | 50.1 | 15664 | 50.8 | 15777 | 100.00 | 98.57 | 100.00 | 99.28 | 89.81 | 89.17 | C P A | C P A | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENTREZG | 48.8 | 15664 | C P A | C P A | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENTREZG | 47.0 | 7696 | 48.5 | 7875 | 87.52 | 84.79 | 83.67 | 81.77 | 69.72 | 68.14 | C P A | C P A | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENTREZG | 91.2 | 11788 | 91.6 | 11838 | 99.65 | 99.22 | 99.53 | 99.11 | 97.45 | 97.03 | C P A | C P A | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENTREZG | 71.0 | 12847 | 71.4 | 12894 | 99.38 | 98.83 | 99.29 | 98.93 | 96.26 | 95.91 | C P A | C P A | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENTREZG | 43.3 | 12492 | 43.4 | 12511 | 100.00 | 99.82 | 100.00 | 99.85 | 98.45 | 98.30 | C P A | C P A | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENTREZG | 72.3 | 1295 | 73.7 | 1307 | 99.35 | 97.37 | 99.46 | 98.55 | 83.40 | 82.63 | C P A | C P A | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENTREZG | 79.2 | 7856 | 80.8 | 7927 | 99.43 | 97.48 | 99.48 | 98.59 | 87.08 | 86.30 | C P A | C P A | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENTREZG | 69.2 | 12078 | 69.9 | 12065 | 98.20 | 97.23 | 98.45 | 98.56 | 82.47 | 82.56 | C P A | C P A | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENTREZG | 69.2 | 12078 | 69.9 | 12065 | 98.20 | 97.23 | 98.45 | 98.56 | 82.47 | 82.56 | C P A | C P A | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENTREZG | 41.6 | 7818 | 37.7 | 7037 | 87.75 | 96.77 | 87.27 | 96.96 | 74.25 | 82.49 | C P A | C P A | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENTREZG | 51.1 | 19008 | 49.2 | 18123 | 92.99 | 96.75 | 92.91 | 97.45 | 75.85 | 79.55 | C P A | C P A | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENTREZG | 77.6 | 18654 | 78.0 | 18606 | 98.44 | 97.97 | 98.64 | 98.90 | 82.04 | 82.25 | C P A | C P A | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENTREZG | 72.0 | 8337 | 72.9 | 8358 | 98.57 | 97.34 | 98.74 | 98.49 | 82.04 | 81.84 | C P A | C P A | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENTREZG | 72.1 | 8338 | 73.0 | 8359 | 98.57 | 97.35 | 98.74 | 98.49 | 82.05 | 81.84 | C P A | C P A | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENTREZG | 49.1 | 5514 | 46.1 | 5161 | 91.54 | 97.48 | 91.88 | 98.16 | 77.91 | 83.24 | C P A | C P A | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENTREZG | 33.4 | 3942 | 31.2 | 3668 | 89.90 | 96.21 | 90.39 | 97.14 | 75.32 | 80.94 | C P A | C P A | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENTREZG | 17.5 | 2439 | 15.6 | 2169 | 84.35 | 94.72 | 84.95 | 95.53 | 74.42 | 83.68 | C P A | C P A | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENTREZG | 33.6 | 4043 | 30.5 | 3656 | 87.07 | 96.03 | 87.31 | 96.55 | 75.41 | 83.40 | C P A | C P A | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENTREZG | 69.2 | 12078 | 69.9 | 12065 | 98.20 | 97.23 | 98.45 | 98.56 | 82.47 | 82.56 | C P A | C P A | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENTREZG | 41.5 | 7818 | 37.6 | 7037 | 87.75 | 96.77 | 87.27 | 96.96 | 74.25 | 82.49 | C P A | C P A | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENTREZG | 52.2 | 18909 | 50.4 | 18040 | 93.53 | 96.87 | 92.98 | 97.46 | 76.91 | 80.62 | C P A | C P A | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENTREZG | 72.1 | 5186 | 73.5 | 5224 | 99.16 | 97.25 | 99.23 | 98.51 | 79.46 | 78.89 | C P A | C P A | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENTREZG | 22.2 | 22994 | 22.0 | 22517 | 95.44 | 96.59 | 89.03 | 90.92 | 60.21 | 61.49 | C P A | C P A | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_ENTREZG | 70.0 | 19741 | 70.0 | 19628 | 97.52 | 97.52 | 97.24 | 97.80 | 74.40 | 74.83 | C P A | C P A | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_ENTREZG | 68.6 | 19738 | 68.6 | 19622 | 97.52 | 97.52 | 97.25 | 97.82 | 74.40 | 74.84 | C P A | C P A | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENTREZG | 0.6 | 117 | 0.5 | 103 | 82.13 | 94.31 | 84.62 | 96.12 | 82.05 | 93.20 | C P A | C P A | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENTREZG | 0.8 | 2966 | 0.8 | 2803 | 88.06 | 95.12 | 89.01 | 94.18 | 85.67 | 90.65 | C P A | C P A | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENTREZG | 1.1 | 3541 | 1.0 | 3321 | 88.58 | 94.80 | 88.48 | 94.34 | 85.48 | 91.15 | C P A | C P A | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENTREZG | 1.0 | 910 | 0.9 | 851 | 86.75 | 94.50 | 88.57 | 94.71 | 84.51 | 90.36 | C P A | C P A | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENTREZG | 0.7 | 742 | 0.7 | 675 | 86.03 | 94.77 | 86.66 | 95.26 | 81.81 | 89.93 | C P A | C P A | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENTREZG | 70.0 | 17055 | 69.9 | 16944 | 96.92 | 97.02 | 97.18 | 97.82 | 85.27 | 85.82 | C P A | C P A | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENTREZG | 49.7 | 18896 | 47.7 | 18011 | 92.88 | 96.63 | 92.89 | 97.46 | 76.01 | 79.74 | C P A | C P A | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENTREZG | 28.6 | 5368 | 28.8 | 5390 | 97.13 | 96.36 | 96.89 | 96.49 | 85.51 | 85.16 | C P A | C P A | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENTREZG | 39.2 | 14760 | 48.5 | 16037 | 92.43 | 74.87 | 91.47 | 84.19 | 53.35 | 49.10 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENTREZG | 70.6 | 12251 | 68.6 | 12184 | 94.46 | 97.15 | 97.34 | 97.87 | 80.21 | 80.65 | C P A | C P A | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENTREZG | 36.1 | 6901 | 29.3 | 5780 | 76.67 | 94.57 | 78.80 | 94.08 | 66.64 | 79.57 | C P A | C P A | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENTREZG | 52.7 | 17306 | 48.3 | 16492 | 88.43 | 96.40 | 92.16 | 96.71 | 73.87 | 77.52 | C P A | C P A | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENTREZG | 61.9 | 7855 | 60.7 | 7769 | 94.74 | 96.68 | 96.23 | 97.30 | 79.17 | 80.05 | C P A | C P A | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENTREZG | 56.1 | 6316 | 49.3 | 5707 | 84.98 | 96.69 | 88.03 | 97.42 | 72.88 | 80.66 | C P A | C P A | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENTREZG | 25.0 | 3345 | 21.3 | 2903 | 80.96 | 95.12 | 82.30 | 94.83 | 73.81 | 85.05 | C P A | C P A | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENTREZG | 70.7 | 12251 | 68.7 | 12184 | 94.46 | 97.15 | 97.34 | 97.87 | 80.21 | 80.65 | C P A | C P A | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENTREZG | 36.2 | 6901 | 29.3 | 5780 | 76.67 | 94.57 | 78.80 | 94.08 | 66.64 | 79.57 | C P A | C P A | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENTREZG | 22.5 | 23243 | 21.9 | 24452 | 91.41 | 94.07 | 88.10 | 83.74 | 51.04 | 48.52 | C P A | C P A | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_ENTREZG | 73.2 | 21225 | 71.2 | 21212 | 91.98 | 94.60 | 93.18 | 93.23 | 62.57 | 62.61 | C P A | C P A | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_ENTREZG | 72.2 | 21225 | 70.2 | 21212 | 91.96 | 94.59 | 93.18 | 93.23 | 62.56 | 62.60 | C P A | C P A | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENTREZG | 53.6 | 17306 | 49.2 | 16492 | 88.43 | 96.40 | 92.16 | 96.71 | 73.87 | 77.52 | C P A | C P A | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENTREZG | 70.7 | 12251 | 68.7 | 12184 | 94.46 | 97.15 | 97.34 | 97.87 | 80.21 | 80.65 | C P A | C P A | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENTREZG | 62.2 | 4321 | 61.0 | 4263 | 94.77 | 96.51 | 95.79 | 97.09 | 76.70 | 77.74 | C P A | C P A | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENTREZG | 47.0 | 2849 | 47.3 | 2888 | 97.64 | 96.90 | 97.93 | 96.61 | 80.45 | 79.36 | C P A | C P A | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENTREZG | 63.7 | 16196 | 60.1 | 15428 | 90.16 | 95.66 | 91.42 | 95.97 | 80.26 | 84.26 | C P A | C P A | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENTREZG | 47.1 | 16485 | 43.7 | 15596 | 88.46 | 95.42 | 90.71 | 95.88 | 80.79 | 85.39 | C P A | C P A | O |
Oryza_sativa | Rice | 631066 | Rice_Os_ENTREZG | 41.5 | 23419 | 42.1 | 23535 | 99.95 | 98.58 | 100.00 | 99.50 | 90.33 | 89.89 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENTREZG | 40.8 | 12031 | 39.6 | 11521 | 87.33 | 90.16 | 90.13 | 94.12 | 71.73 | 74.91 | C P A | C P A | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENTREZG | 51.6 | 11736 | 50.7 | 11363 | 89.46 | 90.93 | 91.45 | 94.45 | 73.79 | 76.21 | C P A | C P A | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENTREZG | 54.3 | 8844 | 53.7 | 8633 | 90.86 | 91.92 | 91.92 | 94.16 | 76.89 | 78.77 | C P A | C P A | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENTREZG | 28.8 | 4262 | 26.8 | 3935 | 80.49 | 86.51 | 83.25 | 90.17 | 66.26 | 71.77 | C P A | C P A | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENTREZG | 54.5 | 4262 | 55.2 | 4247 | 94.92 | 93.70 | 94.65 | 94.98 | 76.47 | 76.74 | C P A | C P A | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENTREZG | 34.4 | 3173 | 32.8 | 2997 | 84.01 | 87.94 | 85.28 | 90.29 | 69.74 | 73.84 | C P A | C P A | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENTREZG | 36.9 | 3485 | 35.4 | 3304 | 85.05 | 88.70 | 86.40 | 91.13 | 69.07 | 72.85 | C P A | C P A | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENTREZG | 65.2 | 705 | 67.0 | 707 | 97.01 | 94.41 | 97.30 | 97.03 | 81.70 | 81.47 | C P A | C P A | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENTREZG | 55.8 | 523 | 56.7 | 526 | 94.67 | 93.03 | 95.03 | 94.49 | 67.11 | 66.73 | C P A | C P A | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENTREZG | 21.2 | 20154 | 21.0 | 21282 | 90.10 | 90.63 | 90.38 | 85.59 | 46.46 | 43.99 | C P A | C P A | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_ENTREZG | 64.9 | 19239 | 65.5 | 19353 | 92.41 | 91.64 | 92.53 | 91.99 | 57.57 | 57.23 | C P A | C P A | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_ENTREZG | 64.0 | 19239 | 64.5 | 19353 | 92.40 | 91.63 | 92.53 | 91.99 | 57.57 | 57.23 | C P A | C P A | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENTREZG | 41.9 | 12031 | 40.6 | 11521 | 87.33 | 90.16 | 90.13 | 94.12 | 71.73 | 74.91 | C P A | C P A | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENTREZG | 52.5 | 1318 | 52.9 | 1315 | 93.66 | 92.94 | 93.63 | 93.84 | 81.94 | 82.13 | C P A | C P A | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENTREZG | 67.5 | 5490 | 67.6 | 5496 | 100.00 | 99.81 | 100.00 | 99.89 | 98.78 | 98.67 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENTREZG | 51.1 | 5566 | 51.2 | 5571 | 100.00 | 99.88 | 100.00 | 99.91 | 99.53 | 99.44 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENTREZG | 28.9 | 6419 | 10.0 | 2209 | 27.04 | 78.11 | 24.63 | 71.57 | 17.87 | 51.92 | C P A | C P A | O |