Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Anopheles_gambiae | PlasmodiumAnopheles | 250758 | PlasmodiumAnopheles_Ag_ENTREZG | 1.7 | 408 | 1.7 | 408 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Arabidopsis_thaliana | AG | 131822 | AG_At_ENTREZG | 83.2 | 7359 | 83.1 | 7352 | 99.78 | 99.89 | 99.71 | 99.81 | 99.06 | 99.16 | C P | C P | O |
Arabidopsis_thaliana | AGRONOMICS1 | 6046951 | AGRONOMICS1_At_ENTREZG | 20.0 | 30851 | 19.7 | 30749 | 98.69 | 99.79 | 99.45 | 99.78 | 92.63 | 92.93 | C P | C P | O |
Arabidopsis_thaliana | ATH1121501 | 251078 | ATH1121501_At_ENTREZG | 84.9 | 21236 | 84.9 | 21225 | 99.77 | 99.84 | 99.69 | 99.74 | 99.16 | 99.21 | C P | C P | O |
Arabidopsis_thaliana | aragene10st | 628424 | aragene10st_At_ENTREZG | 93.3 | 27602 | C P | C P | O | ||||||||
Arabidopsis_thaliana | aragene11st | 628424 | aragene11st_At_ENTREZG | 93.3 | 27602 | C P | C P | O | ||||||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENTREZG | 43.1 | 9409 | 43.0 | 9403 | 99.83 | 100.00 | 99.94 | 100.00 | 98.35 | 98.42 | C P A | C P A | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENTREZG | 78.8 | 17165 | 78.9 | 17198 | 99.83 | 99.68 | 99.84 | 99.65 | 97.08 | 96.89 | C P A | C P A | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENTREZG | 53.1 | 16755 | 50.1 | 15664 | 88.21 | 93.44 | 89.33 | 95.56 | 70.34 | 75.24 | C P A | C P A | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENTREZG | 51.7 | 16755 | 48.8 | 15664 | 88.21 | 93.44 | 89.33 | 95.56 | 70.34 | 75.24 | C P A | C P A | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENTREZG | 66.6 | 17768 | C P A | C P A | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENTREZG | 53.1 | 8548 | 47.0 | 7696 | 84.62 | 95.52 | 84.45 | 93.80 | 75.96 | 84.37 | C P A | C P A | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENTREZG | 41.8 | 23877 | C P A | C P A | O | ||||||||
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENTREZG | 41.8 | 23877 | C P A | C P A | O | ||||||||
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENTREZG | 91.0 | 11719 | 91.2 | 11788 | 99.78 | 99.54 | 99.69 | 99.11 | 98.99 | 98.41 | C P A | C P A | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENTREZG | 70.6 | 12746 | 71.0 | 12847 | 99.55 | 99.00 | 99.36 | 98.58 | 97.97 | 97.20 | C P A | C P A | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENTREZG | 69.1 | 17624 | C P | C P | O | ||||||||
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENTREZG | 43.3 | 12492 | 43.3 | 12492 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENTREZG | 69.6 | 13310 | C P A | C P A | O | ||||||||
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENTREZG | 69.6 | 13310 | C P A | C P A | O | ||||||||
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENTREZG | 72.2 | 1292 | 72.3 | 1295 | 99.70 | 99.62 | 99.85 | 99.61 | 98.84 | 98.61 | C P A | C P A | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENTREZG | 78.9 | 7820 | 79.2 | 7856 | 99.59 | 99.17 | 99.65 | 99.20 | 98.82 | 98.37 | C P A | C P A | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENTREZG | 69.0 | 12012 | 69.2 | 12078 | 99.28 | 99.07 | 99.55 | 99.01 | 98.04 | 97.50 | C P A | C P A | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENTREZG | 69.0 | 12012 | 69.2 | 12078 | 99.28 | 99.07 | 99.55 | 99.01 | 98.04 | 97.50 | C P A | C P A | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENTREZG | 42.2 | 7844 | 41.6 | 7818 | 97.04 | 98.43 | 97.31 | 97.63 | 95.42 | 95.74 | C P A | C P A | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENTREZG | 51.5 | 18926 | 51.1 | 19008 | 98.12 | 98.71 | 98.68 | 98.25 | 96.17 | 95.75 | C P A | C P A | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENTREZG | 77.4 | 18567 | 77.6 | 18654 | 99.47 | 99.30 | 99.61 | 99.15 | 98.14 | 97.68 | C P A | C P A | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENTREZG | 72.1 | 8316 | 72.0 | 8337 | 99.30 | 99.38 | 99.51 | 99.26 | 98.29 | 98.04 | C P A | C P A | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENTREZG | 72.1 | 8317 | 72.1 | 8338 | 99.30 | 99.38 | 99.51 | 99.26 | 98.28 | 98.03 | C P A | C P A | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENTREZG | 49.8 | 5561 | 49.1 | 5514 | 97.36 | 98.70 | 97.46 | 98.30 | 96.44 | 97.26 | C P A | C P A | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENTREZG | 33.8 | 3972 | 33.4 | 3942 | 97.37 | 98.65 | 97.43 | 98.17 | 96.02 | 96.75 | C P A | C P A | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENTREZG | 17.9 | 2476 | 17.5 | 2439 | 96.18 | 97.98 | 96.04 | 97.50 | 94.71 | 96.15 | C P A | C P A | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENTREZG | 34.0 | 4068 | 33.6 | 4043 | 97.44 | 98.39 | 97.12 | 97.72 | 95.72 | 96.31 | C P A | C P A | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENTREZG | 69.0 | 12012 | 69.2 | 12078 | 99.28 | 99.07 | 99.55 | 99.01 | 98.04 | 97.50 | C P A | C P A | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENTREZG | 42.1 | 7844 | 41.5 | 7818 | 97.04 | 98.43 | 97.31 | 97.63 | 95.42 | 95.74 | C P A | C P A | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENTREZG | 52.4 | 18837 | 52.2 | 18909 | 98.25 | 98.77 | 98.67 | 98.29 | 96.30 | 95.93 | C P A | C P A | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENTREZG | 71.9 | 5169 | 72.1 | 5186 | 99.54 | 99.30 | 99.67 | 99.34 | 98.16 | 97.84 | C P A | C P A | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENTREZG | 22.3 | 22877 | 22.2 | 22994 | 98.40 | 98.80 | 97.53 | 97.03 | 91.05 | 90.58 | C P A | C P A | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_ENTREZG | 69.7 | 19684 | 70.0 | 19741 | 99.36 | 99.04 | 99.29 | 99.01 | 95.67 | 95.39 | C P A | C P A | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_ENTREZG | 68.4 | 19682 | 68.6 | 19738 | 99.36 | 99.04 | 99.29 | 99.01 | 95.67 | 95.39 | C P A | C P A | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENTREZG | 0.6 | 120 | 0.6 | 117 | 96.27 | 94.31 | 95.00 | 97.44 | 87.50 | 89.74 | C P A | C P A | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENTREZG | 0.8 | 2977 | 0.8 | 2966 | 96.58 | 95.03 | 96.27 | 96.63 | 91.37 | 91.71 | C P A | C P A | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENTREZG | 1.1 | 3529 | 1.1 | 3541 | 96.12 | 94.38 | 96.49 | 96.16 | 90.34 | 90.03 | C P A | C P A | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENTREZG | 1.0 | 927 | 1.0 | 910 | 96.23 | 95.50 | 96.12 | 97.91 | 90.08 | 91.76 | C P A | C P A | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENTREZG | 0.7 | 751 | 0.7 | 742 | 97.39 | 95.34 | 96.94 | 98.11 | 90.95 | 92.05 | C P A | C P A | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENTREZG | 70.2 | 17055 | 70.0 | 17055 | 98.87 | 99.15 | 98.94 | 98.94 | 97.96 | 97.96 | C P A | C P A | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENTREZG | 50.0 | 18818 | 49.7 | 18896 | 98.12 | 98.75 | 98.68 | 98.27 | 96.39 | 95.99 | C P A | C P A | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENTREZG | 28.6 | 5367 | 28.6 | 5368 | 98.95 | 99.10 | 98.77 | 98.75 | 97.67 | 97.65 | C P A | C P A | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENTREZG | 39.2 | 14760 | 39.2 | 14760 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENTREZG | 70.6 | 12251 | 70.6 | 12251 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENTREZG | 36.1 | 6901 | 36.1 | 6901 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENTREZG | 52.7 | 17306 | 52.7 | 17306 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENTREZG | 54.0 | 7107 | C P A | C P A | O | ||||||||
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENTREZG | 61.9 | 7855 | 61.9 | 7855 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENTREZG | 56.1 | 6316 | 56.1 | 6316 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENTREZG | 25.0 | 3345 | 25.0 | 3345 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENTREZG | 70.7 | 12251 | 70.7 | 12251 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENTREZG | 36.2 | 6901 | 36.2 | 6901 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENTREZG | 22.5 | 23243 | 22.5 | 23243 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_ENTREZG | 73.2 | 21225 | 73.2 | 21225 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_ENTREZG | 72.2 | 21225 | 72.2 | 21225 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENTREZG | 53.6 | 17306 | 53.6 | 17306 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENTREZG | 70.7 | 12251 | 70.7 | 12251 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENTREZG | 62.2 | 4321 | 62.2 | 4321 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENTREZG | 47.0 | 2849 | 47.0 | 2849 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENTREZG | 63.7 | 16196 | 63.7 | 16196 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENTREZG | 47.1 | 16485 | 47.1 | 16485 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Oryza_sativa | Rice | 631066 | Rice_Os_ENTREZG | 41.5 | 23419 | 41.5 | 23419 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENTREZG | 40.8 | 12031 | 40.8 | 12031 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENTREZG | 51.6 | 11736 | 51.6 | 11736 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENTREZG | 54.3 | 8844 | 54.3 | 8844 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENTREZG | 28.8 | 4262 | 28.8 | 4262 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENTREZG | 54.5 | 4262 | 54.5 | 4262 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENTREZG | 34.4 | 3173 | 34.4 | 3173 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENTREZG | 36.9 | 3485 | 36.9 | 3485 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENTREZG | 65.2 | 705 | 65.2 | 705 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENTREZG | 55.8 | 523 | 55.8 | 523 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENTREZG | 21.2 | 20154 | 21.2 | 20154 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_ENTREZG | 64.9 | 19239 | 64.9 | 19239 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_ENTREZG | 64.0 | 19239 | 64.0 | 19239 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENTREZG | 41.9 | 12031 | 41.9 | 12031 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENTREZG | 52.5 | 1318 | 52.5 | 1318 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENTREZG | 67.3 | 5480 | 67.5 | 5490 | 99.82 | 99.52 | 99.80 | 99.62 | 98.87 | 98.69 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENTREZG | 51.1 | 5564 | 51.1 | 5566 | 100.00 | 99.88 | 100.00 | 99.96 | 99.25 | 99.21 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENTREZG | 35.6 | 7752 | 28.9 | 6419 | 70.87 | 87.36 | 65.29 | 78.84 | 56.22 | 67.89 | C P A | C P A | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENTREZG | 29.1 | 14369 | C P A | C P A | O | ||||||||
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENTREZG | 63.4 | 17116 | C P A | C P A | O | ||||||||
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENTREZG | 63.4 | 17116 | C P A | C P A | O |