Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_UG | 61.2 | 13198 | 59.9 | 12413 | 88.26 | 90.18 | 83.52 | 88.80 | 67.84 | 72.13 | C P A | C P A | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_UG | 33.9 | 10974 | 33.9 | 10975 | 99.96 | 99.97 | 99.97 | 99.96 | 99.55 | 99.54 | C P A | C P A | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_UG | 33.0 | 10974 | 33.0 | 10975 | 99.96 | 99.97 | 99.97 | 99.96 | 99.55 | 99.54 | C P A | C P A | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_UG | 23.9 | 6258 | C P A | C P A | O | ||||||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_UG | 60.1 | 9646 | 58.8 | 9383 | 95.17 | 97.33 | 92.02 | 94.60 | 80.54 | 82.80 | C P A | C P A | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_UG | 41.2 | 26042 | C P A | C P A | O | ||||||||
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_UG | 41.2 | 26042 | C P A | C P A | O | ||||||||
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_UG | 92.0 | 11794 | 92.1 | 11829 | 99.77 | 99.65 | 99.27 | 98.98 | 98.03 | 97.74 | C P A | C P A | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_UG | 73.4 | 12963 | 73.5 | 13004 | 99.65 | 99.46 | 99.11 | 98.80 | 97.42 | 97.11 | C P A | C P A | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_UG | 50.4 | 15387 | 51.9 | 16288 | 90.85 | 88.18 | 79.62 | 75.21 | 57.28 | 54.11 | C P A | C P A | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_UG | 53.0 | 11058 | C P A | C P A | O | ||||||||
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_UG | 53.0 | 11058 | C P A | C P A | O | ||||||||
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_UG | 70.9 | 1264 | 70.0 | 1254 | 97.65 | 98.83 | 94.62 | 95.37 | 81.01 | 81.66 | C P A | C P A | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_UG | 74.2 | 7490 | 74.2 | 7498 | 97.92 | 97.88 | 94.42 | 94.32 | 84.70 | 84.61 | C P A | C P A | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_UG | 67.2 | 11940 | 67.0 | 11873 | 97.69 | 97.94 | 93.58 | 94.11 | 81.10 | 81.55 | C P A | C P A | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_UG | 67.2 | 11940 | 67.0 | 11872 | 97.69 | 97.94 | 93.58 | 94.12 | 81.10 | 81.56 | C P A | C P A | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_UG | 54.9 | 11314 | 53.9 | 10924 | 94.71 | 96.34 | 89.61 | 92.81 | 77.45 | 80.22 | C P A | C P A | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_UG | 57.7 | 22533 | 57.0 | 21945 | 96.16 | 97.25 | 91.48 | 93.93 | 77.23 | 79.30 | C P A | C P A | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_UG | 76.4 | 18252 | 76.6 | 18206 | 98.73 | 98.43 | 94.41 | 94.65 | 84.98 | 85.20 | C P A | C P A | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_UG | 69.6 | 8268 | 69.5 | 8223 | 97.82 | 97.88 | 93.40 | 93.91 | 83.50 | 83.96 | C P A | C P A | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_UG | 69.6 | 8268 | 69.6 | 8224 | 97.82 | 97.88 | 93.41 | 93.91 | 83.50 | 83.95 | C P A | C P A | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_UG | 60.7 | 7374 | 59.5 | 7156 | 95.27 | 97.18 | 90.70 | 93.46 | 80.53 | 82.98 | C P A | C P A | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_UG | 50.6 | 6455 | 49.1 | 6176 | 93.98 | 96.77 | 89.57 | 93.62 | 78.68 | 82.24 | C P A | C P A | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_UG | 39.5 | 5440 | 38.3 | 5168 | 92.46 | 95.37 | 88.58 | 93.25 | 75.31 | 79.28 | C P A | C P A | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_UG | 45.1 | 5684 | 44.2 | 5459 | 94.25 | 96.13 | 88.65 | 92.31 | 76.44 | 79.59 | C P A | C P A | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_UG | 67.2 | 11940 | 67.0 | 11872 | 97.69 | 97.94 | 93.58 | 94.12 | 81.10 | 81.56 | C P A | C P A | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_UG | 54.8 | 11314 | 53.9 | 10923 | 94.71 | 96.34 | 89.61 | 92.82 | 77.45 | 80.23 | C P A | C P A | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_UG | 57.9 | 22330 | 57.3 | 21773 | 96.33 | 97.30 | 91.59 | 93.94 | 78.43 | 80.44 | C P A | C P A | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_UG | 69.4 | 5080 | 69.1 | 5052 | 97.69 | 98.07 | 94.37 | 94.89 | 79.84 | 80.29 | C P A | C P A | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_UG | 27.5 | 54084 | 27.7 | 52314 | 97.66 | 96.74 | 88.15 | 91.13 | 76.14 | 78.72 | C P A | C P A | O |
Homo_sapiens | HuGene10stv1 | 788904 | HuGene10stv1_Hs_UG | 66.5 | 18518 | 67.0 | 18472 | 99.05 | 98.39 | 94.24 | 94.47 | 84.32 | 84.53 | C P A | C P A | O |
Homo_sapiens | HuGene11stv1 | 803478 | HuGene11stv1_Hs_UG | 65.2 | 18514 | 65.7 | 18470 | 99.06 | 98.39 | 94.24 | 94.47 | 84.33 | 84.53 | C P A | C P A | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_UG | 1.1 | 312 | 0.7 | 257 | 55.29 | 87.94 | 66.67 | 80.93 | 36.54 | 44.36 | C P A | C P A | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_UG | 1.2 | 6244 | 0.8 | 4997 | 58.43 | 91.59 | 70.20 | 87.71 | 40.76 | 50.93 | C P A | C P A | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_UG | 1.5 | 7108 | 1.0 | 5741 | 58.47 | 92.21 | 71.44 | 88.45 | 39.93 | 49.43 | C P A | C P A | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_UG | 1.5 | 2239 | 1.0 | 1929 | 61.67 | 90.72 | 75.44 | 87.56 | 47.07 | 54.64 | C P A | C P A | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_UG | 1.3 | 1980 | 0.8 | 1669 | 59.87 | 91.39 | 74.19 | 88.02 | 45.96 | 54.52 | C P A | C P A | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_UG | 68.5 | 16806 | 68.4 | 16781 | 97.69 | 97.81 | 93.90 | 94.04 | 85.92 | 86.05 | C P A | C P A | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_UG | 55.3 | 22136 | 54.7 | 21636 | 96.08 | 97.15 | 91.81 | 93.94 | 79.10 | 80.93 | C P A | C P A | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_UG | 28.9 | 5375 | 29.2 | 5380 | 98.61 | 97.84 | 94.03 | 93.94 | 87.20 | 87.12 | C P A | C P A | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_UG | 10.9 | 3965 | 10.5 | 3872 | 94.75 | 98.67 | 94.83 | 97.11 | 91.80 | 94.01 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_UG | 71.8 | 12386 | 71.4 | 12324 | 98.57 | 99.12 | 96.53 | 97.01 | 89.78 | 90.23 | C P A | C P A | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_UG | 47.7 | 9502 | 48.1 | 9379 | 96.90 | 96.17 | 92.39 | 93.60 | 86.09 | 87.22 | C P A | C P A | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_UG | 59.0 | 19440 | 59.0 | 19242 | 97.90 | 97.93 | 94.78 | 95.75 | 87.25 | 88.15 | C P A | C P A | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_UG | 55.9 | 7482 | C P A | C P A | O | ||||||||
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_UG | 62.2 | 7878 | 61.8 | 7821 | 98.57 | 99.17 | 96.32 | 97.02 | 90.10 | 90.76 | C P A | C P A | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_UG | 62.1 | 7232 | 61.9 | 7124 | 97.89 | 98.21 | 94.26 | 95.69 | 87.78 | 89.11 | C P A | C P A | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_UG | 36.6 | 4848 | 35.7 | 4703 | 96.08 | 98.43 | 93.30 | 96.17 | 88.68 | 91.41 | C P A | C P A | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_UG | 71.9 | 12386 | 71.5 | 12324 | 98.57 | 99.12 | 96.53 | 97.01 | 89.78 | 90.23 | C P A | C P A | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_UG | 47.8 | 9502 | 48.2 | 9379 | 96.90 | 96.17 | 92.39 | 93.60 | 86.09 | 87.22 | C P A | C P A | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_UG | 27.6 | 38768 | 27.9 | 38488 | 98.54 | 97.62 | 91.31 | 91.97 | 80.41 | 80.99 | C P A | C P A | O |
Mus_musculus | MoGene10stv1 | 819132 | MoGene10stv1_Mm_UG | 69.5 | 19448 | 69.8 | 19536 | 99.11 | 98.62 | 96.45 | 96.02 | 89.28 | 88.88 | C P A | C P A | O |
Mus_musculus | MoGene11stv1 | 828268 | MoGene11stv1_Mm_UG | 68.5 | 19447 | 68.8 | 19535 | 99.12 | 98.61 | 96.45 | 96.02 | 89.28 | 88.88 | C P A | C P A | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_UG | 60.0 | 19440 | 60.0 | 19242 | 97.90 | 97.93 | 94.78 | 95.75 | 87.25 | 88.15 | C P A | C P A | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_UG | 71.9 | 12386 | 71.5 | 12324 | 98.57 | 99.12 | 96.53 | 97.01 | 89.78 | 90.23 | C P A | C P A | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_UG | 62.6 | 4433 | 61.9 | 4390 | 97.89 | 99.05 | 96.10 | 97.04 | 88.13 | 89.00 | C P A | C P A | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_UG | 49.2 | 2843 | 48.6 | 2823 | 97.99 | 99.23 | 96.38 | 97.06 | 87.90 | 88.52 | C P A | C P A | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_UG | 65.2 | 16496 | 65.3 | 16454 | 98.43 | 98.31 | 96.03 | 96.27 | 91.49 | 91.72 | C P A | C P A | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_UG | 53.4 | 17640 | 53.7 | 17565 | 98.16 | 97.77 | 95.45 | 95.86 | 89.60 | 89.98 | C P A | C P A | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_UG | 63.7 | 18905 | 62.7 | 18385 | 96.95 | 98.36 | 94.58 | 97.25 | 84.92 | 87.32 | C P A | C P A | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_UG | 69.8 | 15603 | 69.0 | 15228 | 97.44 | 98.59 | 94.87 | 97.20 | 86.02 | 88.13 | C P A | C P A | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_UG | 70.0 | 11051 | 69.3 | 10890 | 97.94 | 98.95 | 95.81 | 97.23 | 88.98 | 90.29 | C P A | C P A | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_UG | 60.1 | 9268 | 58.9 | 8968 | 95.88 | 97.75 | 93.32 | 96.44 | 82.19 | 84.94 | C P A | C P A | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_UG | 64.9 | 4777 | 64.6 | 4746 | 98.69 | 99.13 | 97.01 | 97.64 | 90.04 | 90.62 | C P A | C P A | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_UG | 58.4 | 5420 | 56.6 | 5237 | 95.83 | 98.86 | 93.47 | 96.73 | 84.11 | 87.05 | C P A | C P A | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_UG | 57.4 | 5413 | 56.2 | 5272 | 96.40 | 98.41 | 93.53 | 96.04 | 84.89 | 87.16 | C P A | C P A | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_UG | 74.8 | 734 | 74.4 | 727 | 99.39 | 99.92 | 98.09 | 99.04 | 93.19 | 94.09 | C P A | C P A | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_UG | 61.8 | 543 | 61.5 | 543 | 99.08 | 99.54 | 97.79 | 97.79 | 91.90 | 91.90 | C P A | C P A | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_UG | 23.6 | 30599 | 23.7 | 30436 | 99.22 | 98.68 | 93.74 | 94.24 | 87.05 | 87.52 | C P A | C P A | O |
Rattus_norvegicus | RaGene10stv1 | 777760 | RaGene10stv1_Rn_UG | 62.5 | 17925 | 62.5 | 17838 | 99.66 | 99.52 | 96.41 | 96.88 | 94.03 | 94.49 | C P A | C P A | O |
Rattus_norvegicus | RaGene11stv1 | 788189 | RaGene11stv1_Rn_UG | 61.6 | 17924 | 61.6 | 17837 | 99.66 | 99.52 | 96.41 | 96.88 | 94.03 | 94.49 | C P A | C P A | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_UG | 65.3 | 18905 | 64.3 | 18385 | 96.95 | 98.36 | 94.58 | 97.25 | 84.92 | 87.32 | C P A | C P A | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_UG | 67.8 | 1656 | 67.2 | 1632 | 98.12 | 98.97 | 96.68 | 98.10 | 90.94 | 92.28 | C P A | C P A | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_UG | 28.2 | 6925 | 30.5 | 7644 | 96.65 | 89.34 | 91.15 | 82.57 | 86.38 | 78.26 | C P A | C P A | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_UG | 18.9 | 11144 | C P A | C P A | O | ||||||||
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_UG | 25.7 | 8128 | C P A | C P A | O | ||||||||
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_UG | 25.7 | 8128 | C P A | C P A | O |