Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Anopheles_gambiae | PlasmodiumAnopheles | 250758 | PlasmodiumAnopheles_Ag_ENTREZG | 1.7 | 408 | 1.7 | 408 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Arabidopsis_thaliana | AG | 131822 | AG_At_ENTREZG | 83.2 | 7359 | 83.2 | 7359 | 100.00 | 100.00 | 100.00 | 100.00 | 99.99 | 99.99 | C P | C P | O |
Arabidopsis_thaliana | AGRONOMICS1 | 6046951 | AGRONOMICS1_At_ENTREZG | 20.0 | 30851 | 20.0 | 30851 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Arabidopsis_thaliana | ATH1121501 | 251078 | ATH1121501_At_ENTREZG | 84.9 | 21236 | 84.9 | 21236 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Arabidopsis_thaliana | aragene10st | 628424 | aragene10st_At_ENTREZG | 93.3 | 27602 | 93.3 | 27602 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Arabidopsis_thaliana | aragene11st | 628424 | aragene11st_At_ENTREZG | 93.3 | 27602 | 93.3 | 27602 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENTREZG | 45.8 | 9864 | 43.1 | 9409 | 92.13 | 98.03 | 92.41 | 96.88 | 88.30 | 92.57 | C P A | C P A | O |
Bos_taurus | bovgene10st | 557951 | bovgene10st_Bt_ENTREZG | 74.4 | 18809 | C P A | C P A | O | ||||||||
Bos_taurus | bovgene11st | 557951 | bovgene11st_Bt_ENTREZG | 74.4 | 18809 | C P A | C P A | O | ||||||||
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENTREZG | 76.4 | 17003 | 78.8 | 17165 | 99.12 | 96.10 | 99.95 | 99.00 | 71.28 | 70.60 | C P A | C P A | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENTREZG | 53.0 | 16710 | 53.1 | 16755 | 98.86 | 98.76 | 94.93 | 94.67 | 93.15 | 92.90 | C P A | C P A | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENTREZG | 51.6 | 16710 | 51.7 | 16755 | 98.86 | 98.76 | 94.93 | 94.67 | 93.15 | 92.90 | C P A | C P A | O |
Canis_familiaris | cangene10st | 657153 | cangene10st_Cf_ENTREZG | 62.8 | 17637 | C P A | C P A | O | ||||||||
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENTREZG | 66.3 | 17637 | 66.6 | 17768 | 98.99 | 98.57 | 94.86 | 94.16 | 91.57 | 90.90 | C P A | C P A | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENTREZG | 53.3 | 8550 | 53.1 | 8548 | 99.61 | 99.98 | 99.98 | 100.00 | 95.13 | 95.16 | C P A | C P A | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENTREZG | 41.8 | 23877 | 41.8 | 23877 | 99.99 | 100.00 | 100.00 | 100.00 | 99.89 | 99.89 | C P A | C P A | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENTREZG | 41.8 | 23877 | 41.8 | 23877 | 99.99 | 100.00 | 100.00 | 100.00 | 99.89 | 99.89 | C P A | C P A | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENTREZG | 91.0 | 11719 | 91.0 | 11719 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P A | C P A | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENTREZG | 70.5 | 12736 | 70.6 | 12746 | 100.00 | 99.93 | 100.00 | 99.92 | 100.00 | 99.92 | C P A | C P A | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENTREZG | 69.1 | 17624 | 69.1 | 17624 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Equus_caballus | equgene11st | 543179 | equgene11st_EQca_ENTREZG | 68.4 | 17624 | C P | C P | O | ||||||||
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENTREZG | 46.6 | 13250 | 43.3 | 12492 | 86.83 | 93.43 | 88.41 | 93.77 | 69.96 | 74.21 | C P A | C P A | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENTREZG | 73.6 | 13910 | 69.6 | 13310 | 89.46 | 94.62 | 89.71 | 93.76 | 59.88 | 62.58 | C P A | C P A | O |
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENTREZG | 73.6 | 13910 | 69.6 | 13310 | 89.46 | 94.62 | 89.71 | 93.76 | 59.88 | 62.58 | C P A | C P A | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENTREZG | 72.2 | 1292 | 72.2 | 1292 | 99.99 | 99.97 | 100.00 | 100.00 | 99.46 | 99.46 | C P A | C P A | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENTREZG | 78.9 | 7820 | 78.9 | 7820 | 99.98 | 99.97 | 100.00 | 100.00 | 99.57 | 99.57 | C P A | C P A | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENTREZG | 69.0 | 12012 | 69.0 | 12012 | 99.99 | 99.98 | 100.00 | 100.00 | 99.58 | 99.58 | C P A | C P A | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENTREZG | 69.0 | 12012 | 69.0 | 12012 | 99.99 | 99.98 | 100.00 | 100.00 | 99.58 | 99.58 | C P A | C P A | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENTREZG | 42.2 | 7845 | 42.2 | 7844 | 99.99 | 99.98 | 99.99 | 100.00 | 99.73 | 99.75 | C P A | C P A | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENTREZG | 51.4 | 18927 | 51.5 | 18926 | 99.99 | 99.98 | 99.99 | 100.00 | 99.58 | 99.58 | C P A | C P A | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENTREZG | 77.5 | 18567 | 77.4 | 18567 | 100.00 | 100.00 | 100.00 | 100.00 | 99.91 | 99.91 | C P A | C P A | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENTREZG | 72.1 | 8316 | 72.1 | 8316 | 99.99 | 99.98 | 100.00 | 100.00 | 99.72 | 99.72 | C P A | C P A | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENTREZG | 72.1 | 8317 | 72.1 | 8317 | 99.99 | 99.98 | 100.00 | 100.00 | 99.72 | 99.72 | C P A | C P A | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENTREZG | 49.8 | 5561 | 49.8 | 5561 | 100.00 | 99.99 | 100.00 | 100.00 | 99.87 | 99.87 | C P A | C P A | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENTREZG | 33.8 | 3972 | 33.8 | 3972 | 100.00 | 99.98 | 100.00 | 100.00 | 99.70 | 99.70 | C P A | C P A | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENTREZG | 17.9 | 2475 | 17.9 | 2476 | 100.00 | 99.98 | 100.00 | 99.96 | 99.84 | 99.80 | C P A | C P A | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENTREZG | 34.0 | 4067 | 34.0 | 4068 | 99.98 | 99.98 | 100.00 | 99.98 | 99.70 | 99.68 | C P A | C P A | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENTREZG | 69.0 | 12012 | 69.0 | 12012 | 99.99 | 99.98 | 100.00 | 100.00 | 99.58 | 99.58 | C P A | C P A | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENTREZG | 42.1 | 7845 | 42.1 | 7844 | 99.99 | 99.98 | 99.99 | 100.00 | 99.73 | 99.75 | C P A | C P A | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENTREZG | 52.4 | 18837 | 52.4 | 18837 | 99.99 | 99.98 | 100.00 | 100.00 | 99.64 | 99.64 | C P A | C P A | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENTREZG | 71.9 | 5169 | 71.9 | 5169 | 99.99 | 99.96 | 100.00 | 100.00 | 99.36 | 99.36 | C P A | C P A | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENTREZG | 22.3 | 22877 | 22.3 | 22877 | 100.00 | 100.00 | 100.00 | 100.00 | 99.98 | 99.98 | C P A | C P A | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENTREZG | 0.6 | 120 | 0.6 | 120 | 100.00 | 99.17 | 100.00 | 100.00 | 98.33 | 98.33 | C P A | C P A | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENTREZG | 0.8 | 2953 | 0.8 | 2977 | 99.68 | 97.27 | 99.97 | 99.16 | 95.26 | 94.49 | C P A | C P A | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENTREZG | 1.0 | 3515 | 1.1 | 3529 | 99.53 | 97.76 | 99.97 | 99.57 | 95.19 | 94.81 | C P A | C P A | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENTREZG | 0.9 | 927 | 1.0 | 927 | 99.56 | 97.40 | 100.00 | 100.00 | 93.74 | 93.74 | C P A | C P A | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENTREZG | 0.7 | 751 | 0.7 | 751 | 99.77 | 97.35 | 100.00 | 100.00 | 95.34 | 95.34 | C P A | C P A | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENTREZG | 70.2 | 17054 | 70.2 | 17055 | 99.99 | 99.98 | 100.00 | 99.99 | 99.79 | 99.78 | C P A | C P A | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_ENTREZG | 80.0 | 18560 | C P A | C P A | O | ||||||||
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_ENTREZG | 66.3 | 12012 | 66.3 | 12012 | 99.99 | 99.98 | 100.00 | 100.00 | 99.58 | 99.58 | C P A | C P A | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENTREZG | 50.0 | 18818 | 50.0 | 18818 | 99.99 | 99.98 | 100.00 | 100.00 | 99.60 | 99.60 | C P A | C P A | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_ENTREZG | 39.3 | 21236 | C P A | C P A | O | ||||||||
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENTREZG | 28.6 | 5367 | 28.6 | 5367 | 99.99 | 99.99 | 100.00 | 100.00 | 99.85 | 99.85 | C P A | C P A | O |
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_ENTREZG | 69.7 | 19684 | 69.7 | 19684 | 100.00 | 100.00 | 100.00 | 100.00 | 99.99 | 99.99 | C P A | C P A | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_ENTREZG | 68.4 | 19682 | 68.4 | 19682 | 100.00 | 100.00 | 100.00 | 100.00 | 99.99 | 99.99 | C P A | C P A | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_ENTREZG | 41.7 | 24092 | C P A | C P A | O | ||||||||
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_ENTREZG | 41.7 | 24092 | C P A | C P A | O | ||||||||
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENTREZG | 39.3 | 14764 | 39.2 | 14760 | 99.76 | 100.00 | 99.97 | 100.00 | 96.57 | 96.60 | C P | C P | O |
Macaca_mulatta | rhegene10st | 810924 | rhegene10st_MAmu_ENTREZG | 59.8 | 22258 | C P | C P | O | ||||||||
Macaca_mulatta | rhegene11st | 810924 | rhegene11st_MAmu_ENTREZG | 59.8 | 22258 | C P | C P | O | ||||||||
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENTREZG | 71.0 | 12286 | 70.6 | 12251 | 99.19 | 99.81 | 99.43 | 99.71 | 98.58 | 98.86 | C P A | C P A | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENTREZG | 37.3 | 7130 | 36.1 | 6901 | 95.60 | 98.69 | 94.66 | 97.80 | 93.34 | 96.44 | C P A | C P A | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENTREZG | 53.5 | 17502 | 52.7 | 17306 | 97.96 | 99.43 | 97.85 | 98.95 | 96.42 | 97.51 | C P A | C P A | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENTREZG | 54.5 | 7166 | 54.0 | 7107 | 99.03 | 99.82 | 98.90 | 99.72 | 98.51 | 99.32 | C P A | C P A | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENTREZG | 62.3 | 7887 | 61.9 | 7855 | 99.29 | 99.83 | 99.35 | 99.76 | 98.85 | 99.25 | C P A | C P A | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENTREZG | 56.9 | 6373 | 56.1 | 6316 | 98.20 | 99.53 | 98.18 | 99.07 | 97.13 | 98.01 | C P A | C P A | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENTREZG | 25.6 | 3436 | 25.0 | 3345 | 96.91 | 99.21 | 96.13 | 98.74 | 95.40 | 98.00 | C P A | C P A | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENTREZG | 71.1 | 12286 | 70.7 | 12251 | 99.19 | 99.81 | 99.43 | 99.71 | 98.58 | 98.86 | C P A | C P A | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENTREZG | 37.3 | 7130 | 36.2 | 6901 | 95.60 | 98.69 | 94.66 | 97.80 | 93.34 | 96.44 | C P A | C P A | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENTREZG | 22.9 | 23901 | 22.5 | 23243 | 97.57 | 99.30 | 94.68 | 97.36 | 89.98 | 92.53 | C P A | C P A | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENTREZG | 54.4 | 17502 | 53.6 | 17306 | 97.96 | 99.43 | 97.85 | 98.95 | 96.42 | 97.51 | C P A | C P A | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENTREZG | 71.1 | 12286 | 70.7 | 12251 | 99.19 | 99.81 | 99.43 | 99.71 | 98.58 | 98.86 | C P A | C P A | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENTREZG | 62.5 | 4347 | 62.2 | 4321 | 99.13 | 99.76 | 99.15 | 99.75 | 98.62 | 99.21 | C P A | C P A | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENTREZG | 47.2 | 2858 | 47.0 | 2849 | 99.38 | 99.85 | 99.41 | 99.72 | 98.60 | 98.91 | C P A | C P A | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENTREZG | 64.2 | 16294 | 63.7 | 16196 | 98.59 | 99.36 | 98.54 | 99.14 | 97.95 | 98.54 | C P A | C P A | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENTREZG | 48.0 | 16752 | 47.1 | 16485 | 97.35 | 99.21 | 97.36 | 98.94 | 96.63 | 98.19 | C P A | C P A | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_ENTREZG | 73.4 | 21187 | 73.2 | 21225 | 99.02 | 99.30 | 98.88 | 98.70 | 96.14 | 95.97 | C P A | C P A | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_ENTREZG | 72.4 | 21187 | 72.2 | 21225 | 99.02 | 99.30 | 98.88 | 98.70 | 96.14 | 95.97 | C P A | C P A | O |
Oryctolagus_cuniculus | Rabbit2a520535F | 226371 | Rabbit2a520535F_Oc_ENTREZG | 39.4 | 9156 | C P | C P | O | ||||||||
Oryza_sativa | Rice | 631066 | Rice_Os_ENTREZG | 11.4 | 7385 | 41.5 | 23419 | 76.45 | 21.00 | 80.92 | 25.52 | 39.69 | 12.52 | C P | C P | O |
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENTREZG | 67.3 | 5480 | 67.3 | 5480 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENTREZG | 51.1 | 5564 | 51.1 | 5564 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENTREZG | 35.7 | 7753 | 35.6 | 7752 | 99.84 | 100.00 | 99.99 | 100.00 | 98.32 | 98.34 | C P A | C P A | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENTREZG | 29.1 | 14371 | 29.1 | 14369 | 99.97 | 100.00 | 99.99 | 100.00 | 99.53 | 99.54 | C P A | C P A | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENTREZG | 63.4 | 17118 | 63.4 | 17116 | 99.96 | 100.00 | 99.99 | 100.00 | 99.64 | 99.65 | C P A | C P A | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENTREZG | 63.4 | 17118 | 63.4 | 17116 | 99.96 | 100.00 | 99.99 | 100.00 | 99.64 | 99.65 | C P A | C P A | O |