Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene10st | 657153 | cangene10st_Cf_VEGAT | 0.1 | 70 | C P | C P | O | ||||||||
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_VEGAT | 0.1 | 70 | 0.1 | 70 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAT | 45.8 | 9246 | 44.7 | 8970 | 97.57 | 99.97 | 96.70 | 99.68 | 96.48 | 99.45 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_VEGAT | 33.4 | 27714 | 32.5 | 26872 | 97.20 | 99.89 | 96.47 | 99.49 | 95.43 | 98.42 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_VEGAT | 33.4 | 27714 | 32.5 | 26872 | 97.20 | 99.89 | 96.47 | 99.49 | 95.43 | 98.42 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAT | 74.1 | 5332 | 73.0 | 5068 | 98.12 | 99.55 | 94.69 | 99.63 | 94.64 | 99.57 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAT | 79.3 | 28166 | 77.7 | 26801 | 97.64 | 99.65 | 94.80 | 99.63 | 94.76 | 99.59 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAT | 72.5 | 49030 | 70.8 | 46640 | 97.19 | 99.58 | 94.74 | 99.60 | 94.65 | 99.50 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAT | 72.5 | 49030 | 70.8 | 46640 | 97.19 | 99.58 | 94.74 | 99.60 | 94.65 | 99.50 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAT | 49.0 | 25088 | 47.6 | 23895 | 96.63 | 99.59 | 94.73 | 99.46 | 94.61 | 99.33 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAT | 59.5 | 75964 | 57.8 | 72149 | 96.74 | 99.59 | 94.57 | 99.57 | 94.44 | 99.43 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_VEGAT | 79.4 | 79766 | 77.6 | 75658 | 97.32 | 99.62 | 94.48 | 99.61 | 94.35 | 99.48 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_VEGAT | 73.6 | 31231 | 72.3 | 29847 | 97.67 | 99.51 | 95.17 | 99.58 | 95.09 | 99.49 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAT | 73.7 | 31196 | 72.3 | 29813 | 97.67 | 99.51 | 95.16 | 99.57 | 95.08 | 99.49 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAT | 54.7 | 17560 | 53.0 | 16679 | 96.65 | 99.70 | 94.54 | 99.53 | 94.46 | 99.45 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAT | 41.4 | 13602 | 40.2 | 12889 | 96.66 | 99.55 | 94.16 | 99.37 | 94.12 | 99.33 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAT | 27.0 | 9244 | 26.0 | 8808 | 95.94 | 99.73 | 94.87 | 99.57 | 94.84 | 99.53 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAT | 40.5 | 14083 | 39.4 | 13452 | 96.92 | 99.55 | 94.97 | 99.43 | 94.89 | 99.34 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_VEGAT | 72.5 | 49030 | 70.8 | 46640 | 97.19 | 99.58 | 94.74 | 99.60 | 94.65 | 99.50 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_VEGAT | 48.9 | 25088 | 47.5 | 23895 | 96.63 | 99.59 | 94.73 | 99.46 | 94.61 | 99.33 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAT | 59.8 | 74548 | 58.1 | 70838 | 96.80 | 99.59 | 94.62 | 99.57 | 94.48 | 99.43 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAT | 73.1 | 20978 | 71.7 | 20046 | 97.68 | 99.56 | 95.18 | 99.61 | 95.09 | 99.51 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_VEGAT | 29.4 | 159636 | 28.5 | 150537 | 96.62 | 99.59 | 93.90 | 99.57 | 93.55 | 99.21 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAT | 0.6 | 391 | 0.5 | 364 | 94.53 | 100.00 | 93.09 | 100.00 | 93.09 | 100.00 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAT | 0.7 | 8727 | 0.7 | 8359 | 96.13 | 99.55 | 95.32 | 99.52 | 95.29 | 99.49 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAT | 0.9 | 11931 | 0.9 | 11362 | 95.83 | 99.45 | 94.64 | 99.38 | 94.61 | 99.35 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAT | 0.8 | 3123 | 0.8 | 3005 | 96.46 | 99.74 | 96.00 | 99.77 | 96.00 | 99.77 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAT | 0.7 | 2356 | 0.7 | 2270 | 96.80 | 99.80 | 96.10 | 99.74 | 96.10 | 99.74 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAT | 74.4 | 53507 | 72.6 | 50986 | 97.29 | 99.60 | 94.85 | 99.54 | 94.77 | 99.45 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_VEGAT | 82.0 | 79600 | C P | C P | O | ||||||||
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_VEGAT | 69.7 | 49047 | C P | C P | O | ||||||||
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAT | 57.6 | 69876 | 55.9 | 66466 | 96.64 | 99.61 | 94.70 | 99.55 | 94.59 | 99.44 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_VEGAT | 46.7 | 80190 | C P | C P | O | ||||||||
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAT | 33.0 | 19639 | 32.3 | 18715 | 97.40 | 99.53 | 94.77 | 99.45 | 94.68 | 99.36 | C P | C P | O |
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_VEGAT | 69.2 | 121831 | 67.6 | 114976 | 97.26 | 99.62 | 93.97 | 99.57 | 93.75 | 99.33 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_VEGAT | 67.9 | 121818 | 66.3 | 114964 | 97.27 | 99.62 | 93.97 | 99.57 | 93.75 | 99.33 | C P | C P | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_VEGAT | 61.2 | 137105 | C P | C P | O | ||||||||
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_VEGAT | 61.2 | 137105 | C P | C P | O | ||||||||
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_VEGAT | 55.2 | 25347 | 55.0 | 25221 | 99.53 | 99.95 | 99.16 | 99.66 | 99.09 | 99.59 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_VEGAT | 31.7 | 11980 | 31.5 | 11906 | 99.33 | 99.93 | 99.17 | 99.78 | 99.14 | 99.76 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAT | 42.9 | 34521 | 42.7 | 34331 | 99.45 | 99.94 | 99.15 | 99.70 | 99.08 | 99.63 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_VEGAT | 41.2 | 13476 | 41.0 | 13400 | 99.47 | 99.99 | 99.04 | 99.60 | 98.95 | 99.51 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAT | 47.3 | 15021 | 47.0 | 14943 | 99.46 | 99.97 | 99.07 | 99.59 | 98.90 | 99.42 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAT | 44.7 | 11445 | 44.6 | 11378 | 99.57 | 99.97 | 99.29 | 99.88 | 99.15 | 99.74 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAT | 21.4 | 5601 | 21.3 | 5561 | 99.43 | 99.89 | 99.13 | 99.84 | 99.09 | 99.80 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAT | 55.3 | 25347 | 55.0 | 25221 | 99.53 | 99.95 | 99.16 | 99.66 | 99.09 | 99.59 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAT | 31.8 | 11980 | 31.6 | 11906 | 99.33 | 99.93 | 99.17 | 99.78 | 99.14 | 99.76 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_VEGAT | 19.8 | 69043 | 19.7 | 68674 | 99.43 | 99.92 | 99.18 | 99.71 | 98.92 | 99.45 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAT | 43.6 | 34521 | 43.4 | 34331 | 99.45 | 99.94 | 99.15 | 99.70 | 99.08 | 99.63 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAT | 55.3 | 25347 | 55.0 | 25221 | 99.53 | 99.95 | 99.16 | 99.66 | 99.09 | 99.59 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAT | 47.0 | 8104 | 46.7 | 8049 | 99.28 | 99.95 | 98.75 | 99.43 | 98.63 | 99.30 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAT | 37.3 | 6652 | 37.1 | 6631 | 99.62 | 99.97 | 99.38 | 99.70 | 99.25 | 99.56 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAT | 49.0 | 26562 | 48.8 | 26410 | 99.48 | 99.93 | 99.12 | 99.69 | 99.02 | 99.59 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAT | 40.8 | 28254 | 40.5 | 28072 | 99.39 | 99.95 | 99.04 | 99.69 | 98.95 | 99.59 | C P | C P | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_VEGAT | 51.9 | 59282 | 51.6 | 58967 | 99.42 | 99.93 | 99.17 | 99.70 | 98.99 | 99.52 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_VEGAT | 51.2 | 59278 | 50.9 | 58963 | 99.42 | 99.93 | 99.17 | 99.70 | 98.99 | 99.52 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_VEGAT | 0.6 | 271 | 0.6 | 236 | 88.90 | 99.12 | 86.72 | 99.58 | 84.50 | 97.03 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_VEGAT | 0.8 | 553 | 0.7 | 531 | 85.82 | 97.56 | 94.76 | 98.68 | 83.73 | 87.19 | C P | C P | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_VEGAT | 0.7 | 478 | 0.6 | 438 | 84.26 | 96.35 | 89.12 | 97.26 | 79.29 | 86.53 | C P | C P | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_VEGAT | 0.7 | 478 | 0.6 | 438 | 84.26 | 96.35 | 89.12 | 97.26 | 79.29 | 86.53 | C P | C P | O |