Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAE | 41.8 | 12035 | 41.6 | 12009 | 99.48 | 99.76 | 99.33 | 99.54 | 99.27 | 99.48 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_VEGAE | 21.3 | 54442 | 21.2 | 54184 | 99.05 | 99.54 | 98.81 | 99.28 | 98.71 | 99.18 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_VEGAE | 21.3 | 54442 | 21.2 | 54184 | 99.05 | 99.54 | 98.81 | 99.28 | 98.71 | 99.18 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAE | 70.8 | 5160 | 66.4 | 4777 | 93.76 | 100.00 | 92.07 | 99.46 | 91.72 | 99.08 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAE | 75.3 | 21735 | 70.6 | 20022 | 93.70 | 99.98 | 91.72 | 99.57 | 91.25 | 99.06 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAE | 69.6 | 42519 | 65.3 | 39253 | 93.81 | 99.97 | 91.88 | 99.53 | 91.46 | 99.07 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAE | 69.6 | 42519 | 65.3 | 39253 | 93.81 | 99.97 | 91.88 | 99.53 | 91.46 | 99.07 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAE | 48.8 | 23665 | 45.7 | 21833 | 93.74 | 99.96 | 91.75 | 99.45 | 91.38 | 99.04 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAE | 58.1 | 71610 | 54.5 | 66085 | 93.71 | 99.96 | 91.80 | 99.48 | 91.33 | 98.97 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_VEGAE | 77.1 | 83790 | 72.5 | 77540 | 93.93 | 99.98 | 92.07 | 99.49 | 91.90 | 99.30 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_VEGAE | 73.4 | 27969 | 68.9 | 25727 | 93.89 | 99.98 | 91.58 | 99.56 | 91.30 | 99.26 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAE | 73.4 | 27920 | 68.9 | 25680 | 93.90 | 99.98 | 91.57 | 99.56 | 91.29 | 99.26 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAE | 55.9 | 16302 | 52.7 | 15052 | 94.12 | 99.92 | 91.84 | 99.46 | 91.49 | 99.08 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAE | 41.7 | 12741 | 39.4 | 11867 | 94.39 | 99.96 | 92.69 | 99.51 | 92.13 | 98.91 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAE | 27.0 | 8462 | 25.3 | 7852 | 93.68 | 99.94 | 92.46 | 99.64 | 92.14 | 99.30 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAE | 40.8 | 13593 | 37.9 | 12446 | 92.84 | 99.94 | 90.95 | 99.33 | 90.63 | 98.99 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_VEGAE | 69.6 | 42519 | 65.3 | 39253 | 93.81 | 99.97 | 91.88 | 99.53 | 91.46 | 99.07 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_VEGAE | 48.7 | 23665 | 45.7 | 21833 | 93.74 | 99.96 | 91.75 | 99.45 | 91.38 | 99.04 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAE | 58.0 | 67368 | 54.4 | 62156 | 93.69 | 99.96 | 91.78 | 99.48 | 91.35 | 99.01 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAE | 72.2 | 19301 | 67.9 | 17798 | 94.14 | 100.00 | 91.83 | 99.59 | 91.13 | 98.83 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_VEGAE | 30.7 | 485656 | 28.9 | 452178 | 94.13 | 99.93 | 92.56 | 99.41 | 92.46 | 99.30 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAE | 1.1 | 309 | 1.0 | 289 | 87.91 | 99.53 | 92.88 | 99.31 | 83.82 | 89.62 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAE | 1.5 | 8747 | 1.4 | 8098 | 89.56 | 99.82 | 92.01 | 99.38 | 84.94 | 91.75 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAE | 2.0 | 11001 | 1.8 | 10129 | 88.97 | 99.80 | 91.41 | 99.28 | 83.73 | 90.94 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAE | 1.7 | 2494 | 1.6 | 2389 | 91.23 | 99.76 | 95.31 | 99.50 | 86.25 | 90.04 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAE | 1.4 | 1955 | 1.2 | 1877 | 91.28 | 99.74 | 95.50 | 99.47 | 87.11 | 90.73 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAE | 72.7 | 45028 | 68.1 | 41414 | 93.63 | 99.98 | 91.48 | 99.46 | 91.11 | 99.06 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_VEGAE | 79.4 | 82559 | 74.6 | 76424 | 94.00 | 99.98 | 92.10 | 99.49 | 91.92 | 99.30 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_VEGAE | 66.9 | 42611 | 62.8 | 39338 | 93.83 | 99.97 | 91.88 | 99.53 | 91.46 | 99.07 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAE | 58.8 | 65329 | 54.9 | 60196 | 93.34 | 99.95 | 91.68 | 99.50 | 91.20 | 98.98 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_VEGAE | 48.1 | 79195 | 45.1 | 73237 | 93.60 | 99.96 | 92.01 | 99.50 | 91.37 | 98.81 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAE | 30.2 | 19270 | 28.3 | 17881 | 93.74 | 99.96 | 92.24 | 99.41 | 92.08 | 99.23 | C P | C P | O |
Homo_sapiens | hta20 | 7577330 | hta20_Hs_VEGAE | 54.2 | 550669 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_VEGAE | 50.5 | 138212 | 47.1 | 127073 | 93.25 | 99.96 | 91.46 | 99.48 | 91.39 | 99.41 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_VEGAE | 49.5 | 138157 | 46.2 | 127021 | 93.25 | 99.96 | 91.46 | 99.48 | 91.39 | 99.40 | C P | C P | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_VEGAE | 44.5 | 120615 | 42.5 | 110861 | 95.19 | 99.80 | 91.41 | 99.46 | 91.29 | 99.32 | C P | C P | O |
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_VEGAE | 44.5 | 120615 | 42.5 | 110861 | 95.19 | 99.80 | 91.41 | 99.46 | 91.29 | 99.32 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_VEGAE | 49.5 | 24169 | 49.3 | 24125 | 99.69 | 99.93 | 99.62 | 99.80 | 99.24 | 99.42 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_VEGAE | 30.1 | 11576 | 29.8 | 11464 | 98.87 | 99.96 | 98.89 | 99.85 | 98.69 | 99.65 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAE | 39.3 | 34109 | 39.1 | 33956 | 99.38 | 99.94 | 99.36 | 99.81 | 99.01 | 99.46 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_VEGAE | 37.9 | 12932 | 37.9 | 12922 | 99.80 | 99.87 | 99.71 | 99.79 | 98.87 | 98.95 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAE | 43.6 | 14435 | 43.6 | 14430 | 99.79 | 99.88 | 99.74 | 99.77 | 98.95 | 98.99 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAE | 42.8 | 11120 | 42.6 | 11078 | 99.37 | 99.93 | 99.37 | 99.75 | 98.80 | 99.18 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAE | 20.8 | 5025 | 20.6 | 4983 | 98.98 | 99.94 | 99.08 | 99.92 | 98.37 | 99.20 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAE | 49.5 | 24169 | 49.4 | 24125 | 99.69 | 99.93 | 99.62 | 99.80 | 99.24 | 99.42 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAE | 30.1 | 11576 | 29.8 | 11464 | 98.87 | 99.96 | 98.89 | 99.85 | 98.69 | 99.65 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_VEGAE | 19.7 | 260178 | 19.6 | 259032 | 99.36 | 99.99 | 99.35 | 99.79 | 99.33 | 99.77 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAE | 40.0 | 34109 | 39.8 | 33956 | 99.38 | 99.94 | 99.36 | 99.81 | 99.01 | 99.46 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAE | 49.5 | 24169 | 49.4 | 24125 | 99.69 | 99.93 | 99.62 | 99.80 | 99.24 | 99.42 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAE | 44.5 | 7816 | 44.5 | 7812 | 99.88 | 99.72 | 99.65 | 99.71 | 97.95 | 98.00 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAE | 32.6 | 7133 | 32.6 | 7124 | 99.68 | 99.81 | 99.55 | 99.68 | 98.28 | 98.40 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAE | 44.2 | 23839 | 43.9 | 23723 | 99.37 | 99.94 | 99.34 | 99.82 | 99.10 | 99.58 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAE | 38.0 | 25545 | 37.8 | 25395 | 99.25 | 99.86 | 99.23 | 99.82 | 98.57 | 99.15 | C P | C P | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_VEGAE | 37.5 | 98845 | 37.2 | 98459 | 99.15 | 100.00 | 99.39 | 99.78 | 99.38 | 99.77 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_VEGAE | 36.9 | 98796 | 36.6 | 98410 | 99.14 | 100.00 | 99.39 | 99.78 | 99.38 | 99.77 | C P | C P | O |
Mus_musculus | mogene20st | 767405 | mogene20st_Mm_VEGAE | 32.1 | 68925 | C P | C P | O | ||||||||
Mus_musculus | mogene21st | 767405 | mogene21st_Mm_VEGAE | 32.1 | 68925 | C P | C P | O |