Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_VEGAT | 0.1 | 58 | 0.1 | 58 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene10st | 657153 | cangene10st_Cf_VEGAT | 0.1 | 70 | 0.1 | 70 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_VEGAT | 0.1 | 70 | 0.1 | 70 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAT | 46.7 | 9442 | 45.8 | 9246 | 97.90 | 99.77 | 97.44 | 99.50 | 97.26 | 99.32 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_VEGAT | 34.3 | 28424 | 33.4 | 27714 | 96.75 | 99.55 | 96.34 | 98.81 | 94.90 | 97.33 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_VEGAT | 34.3 | 28424 | 33.4 | 27714 | 96.75 | 99.55 | 96.34 | 98.81 | 94.90 | 97.33 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAT | 79.0 | 5763 | 74.1 | 5332 | 93.79 | 100.00 | 91.72 | 99.14 | 91.55 | 98.95 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAT | 84.8 | 30469 | 79.3 | 28166 | 93.41 | 99.98 | 91.51 | 99.00 | 91.41 | 98.88 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAT | 77.4 | 53055 | 72.5 | 49030 | 93.58 | 99.92 | 91.45 | 98.96 | 91.23 | 98.72 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAT | 77.4 | 53055 | 72.5 | 49030 | 93.58 | 99.92 | 91.45 | 98.96 | 91.23 | 98.72 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAT | 52.7 | 27464 | 49.0 | 25088 | 92.74 | 99.80 | 90.51 | 99.08 | 90.10 | 98.63 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAT | 63.7 | 82662 | 59.5 | 75964 | 93.19 | 99.85 | 91.01 | 99.03 | 90.63 | 98.63 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_VEGAT | 84.7 | 86577 | 79.4 | 79766 | 93.69 | 99.95 | 91.30 | 99.10 | 90.95 | 98.72 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_VEGAT | 78.6 | 33804 | 73.6 | 31231 | 93.63 | 99.94 | 91.53 | 99.07 | 91.33 | 98.86 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAT | 78.6 | 33765 | 73.7 | 31196 | 93.64 | 99.94 | 91.53 | 99.06 | 91.34 | 98.86 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAT | 58.6 | 19160 | 54.7 | 17560 | 93.13 | 99.83 | 90.76 | 99.03 | 90.43 | 98.67 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAT | 44.2 | 14780 | 41.4 | 13602 | 93.53 | 99.84 | 91.08 | 98.97 | 90.80 | 98.66 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAT | 29.1 | 10084 | 27.0 | 9244 | 92.60 | 99.74 | 90.82 | 99.07 | 90.54 | 98.77 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAT | 43.7 | 15408 | 40.5 | 14083 | 92.35 | 99.73 | 90.54 | 99.06 | 90.24 | 98.73 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_VEGAT | 77.4 | 53055 | 72.5 | 49030 | 93.58 | 99.92 | 91.45 | 98.96 | 91.23 | 98.72 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_VEGAT | 52.7 | 27464 | 48.9 | 25088 | 92.74 | 99.80 | 90.51 | 99.08 | 90.10 | 98.63 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAT | 64.1 | 81137 | 59.8 | 74548 | 93.20 | 99.86 | 91.00 | 99.04 | 90.64 | 98.65 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAT | 77.6 | 22547 | 73.1 | 20978 | 94.16 | 99.99 | 92.16 | 99.05 | 91.98 | 98.86 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_VEGAT | 31.3 | 173987 | 29.4 | 159636 | 93.87 | 99.77 | 90.86 | 99.03 | 90.04 | 98.13 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAT | 0.6 | 416 | 0.6 | 391 | 91.92 | 99.58 | 92.31 | 98.21 | 92.31 | 98.21 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAT | 0.7 | 9290 | 0.7 | 8727 | 94.32 | 99.47 | 93.02 | 99.03 | 92.88 | 98.88 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAT | 1.0 | 12869 | 0.9 | 11931 | 93.24 | 99.16 | 91.76 | 98.97 | 91.61 | 98.81 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAT | 0.9 | 3272 | 0.8 | 3123 | 95.49 | 99.20 | 94.13 | 98.62 | 94.10 | 98.59 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAT | 0.7 | 2488 | 0.7 | 2356 | 95.44 | 99.53 | 93.69 | 98.94 | 93.61 | 98.85 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAT | 79.8 | 58330 | 74.4 | 53507 | 93.16 | 99.93 | 90.82 | 99.01 | 90.59 | 98.76 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_VEGAT | 87.4 | 86393 | 82.0 | 79600 | 93.75 | 99.95 | 91.31 | 99.10 | 90.95 | 98.71 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_VEGAT | 74.4 | 53072 | 69.7 | 49047 | 93.60 | 99.92 | 91.46 | 98.96 | 91.23 | 98.72 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAT | 62.0 | 76006 | 57.6 | 69876 | 92.83 | 99.84 | 91.06 | 99.05 | 90.75 | 98.71 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_VEGAT | 50.2 | 87201 | 46.7 | 80190 | 92.92 | 99.83 | 91.06 | 99.02 | 90.52 | 98.43 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAT | 35.2 | 21389 | 33.0 | 19639 | 93.64 | 99.88 | 91.12 | 99.24 | 90.82 | 98.92 | C P | C P | O |
Homo_sapiens | hta20 | 7577330 | hta20_Hs_VEGAT | 69.1 | 173868 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_VEGAT | 73.8 | 132561 | 69.2 | 121831 | 93.74 | 99.94 | 91.09 | 99.11 | 90.61 | 98.59 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_VEGAT | 72.4 | 132547 | 67.9 | 121818 | 93.74 | 99.93 | 91.09 | 99.11 | 90.61 | 98.59 | C P | C P | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_VEGAT | 63.7 | 148489 | 61.2 | 137105 | 95.15 | 99.09 | 91.36 | 98.94 | 90.82 | 98.36 | C P | C P | O |
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_VEGAT | 63.7 | 148489 | 61.2 | 137105 | 95.15 | 99.09 | 91.36 | 98.94 | 90.82 | 98.36 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_VEGAT | 55.4 | 25432 | 55.2 | 25347 | 99.70 | 100.00 | 99.61 | 99.94 | 99.58 | 99.92 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_VEGAT | 32.0 | 12097 | 31.7 | 11980 | 98.90 | 99.98 | 98.91 | 99.87 | 98.90 | 99.87 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAT | 43.1 | 34716 | 42.9 | 34521 | 99.41 | 99.99 | 99.37 | 99.93 | 99.34 | 99.90 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_VEGAT | 41.3 | 13503 | 41.2 | 13476 | 99.84 | 100.00 | 99.76 | 99.96 | 99.74 | 99.94 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAT | 47.3 | 15051 | 47.3 | 15021 | 99.84 | 100.00 | 99.77 | 99.97 | 99.75 | 99.95 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAT | 45.0 | 11504 | 44.7 | 11445 | 99.40 | 100.00 | 99.38 | 99.90 | 99.38 | 99.90 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAT | 21.6 | 5643 | 21.4 | 5601 | 99.07 | 100.00 | 99.22 | 99.96 | 99.22 | 99.96 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAT | 55.4 | 25432 | 55.3 | 25347 | 99.70 | 100.00 | 99.61 | 99.94 | 99.58 | 99.92 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAT | 32.1 | 12097 | 31.8 | 11980 | 98.90 | 99.98 | 98.91 | 99.87 | 98.90 | 99.87 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_VEGAT | 19.9 | 69582 | 19.8 | 69043 | 99.35 | 100.00 | 99.15 | 99.92 | 99.11 | 99.88 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAT | 43.9 | 34716 | 43.6 | 34521 | 99.41 | 99.99 | 99.37 | 99.93 | 99.34 | 99.90 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAT | 55.4 | 25432 | 55.3 | 25347 | 99.70 | 100.00 | 99.61 | 99.94 | 99.58 | 99.92 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAT | 47.0 | 8124 | 47.0 | 8104 | 99.94 | 100.00 | 99.72 | 99.96 | 99.68 | 99.93 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAT | 37.4 | 6673 | 37.3 | 6652 | 99.76 | 100.00 | 99.64 | 99.95 | 99.64 | 99.95 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAT | 49.3 | 26720 | 49.0 | 26562 | 99.40 | 99.99 | 99.32 | 99.91 | 99.32 | 99.91 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAT | 41.1 | 28421 | 40.8 | 28254 | 99.29 | 100.00 | 99.34 | 99.93 | 99.33 | 99.92 | C P | C P | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_VEGAT | 52.2 | 59587 | 51.9 | 59282 | 99.30 | 100.00 | 99.42 | 99.93 | 99.40 | 99.91 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_VEGAT | 51.5 | 59583 | 51.2 | 59278 | 99.30 | 100.00 | 99.42 | 99.93 | 99.40 | 99.91 | C P | C P | O |
Mus_musculus | mogene20st | 767405 | mogene20st_Mm_VEGAT | 49.2 | 62835 | C P | C P | O | ||||||||
Mus_musculus | mogene21st | 767405 | mogene21st_Mm_VEGAT | 49.2 | 62835 | C P | C P | O | ||||||||
Sus_scrofa | Porcine | 265635 | Porcine_Ss_VEGAT | 5.2 | 2761 | 0.6 | 271 | 11.83 | 99.39 | 9.71 | 98.89 | 9.63 | 98.15 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_VEGAT | 5.2 | 6122 | 0.8 | 553 | 15.54 | 99.63 | 8.92 | 98.73 | 8.84 | 97.83 | C P | C P | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_VEGAT | 6.6 | 5979 | 0.7 | 478 | 10.16 | 99.60 | 7.89 | 98.74 | 7.86 | 98.33 | C P | C P | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_VEGAT | 6.6 | 5979 | 0.7 | 478 | 10.16 | 99.60 | 7.89 | 98.74 | 7.86 | 98.33 | C P | C P | O |