Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Bos_taurus | Bovine | 265627 | Bovine_Bt_ENST | 42.7 | 10108 | 42.7 | 10108 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Bos_taurus | bovgene10st | 557951 | bovgene10st_Bt_ENST | 72.2 | 20672 | 72.2 | 20672 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Bos_taurus | bovgene11st | 557951 | bovgene11st_Bt_ENST | 72.2 | 20672 | 72.2 | 20672 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Caenorhabditis_elegans | Celegans | 249165 | Celegans_Ce_ENST | 87.4 | 27450 | 87.4 | 27450 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2 | 473162 | Canine2_Cf_ENST | 56.9 | 20994 | 56.9 | 20994 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | Canine2PM | 486081 | Canine2PM_Cf_ENST | 55.4 | 20994 | 55.4 | 20994 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene10st | 657153 | cangene10st_Cf_ENST | 62.8 | 23250 | 62.8 | 23250 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Canis_familiaris | cangene11st | 621953 | cangene11st_Cf_ENST | 66.4 | 23250 | 66.4 | 23250 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_ENST | 60.2 | 14577 | 60.1 | 14559 | 99.85 | 99.95 | 99.66 | 99.78 | 99.60 | 99.72 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_ENST | 50.1 | 46541 | 50.1 | 46562 | 99.87 | 99.88 | 99.55 | 99.51 | 99.02 | 98.97 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_ENST | 50.1 | 46541 | 50.1 | 46562 | 99.87 | 99.88 | 99.55 | 99.51 | 99.02 | 98.97 | C P | C P | O |
Drosophila_melanogaster | DrosGenome1 | 195994 | DrosGenome1_Dm_ENST | 92.5 | 23672 | 92.6 | 20830 | 99.84 | 99.80 | 84.40 | 95.92 | 83.94 | 95.40 | C P | C P | O |
Drosophila_melanogaster | Drosophila2 | 265400 | Drosophila2_Dm_ENST | 74.5 | 25205 | 74.6 | 22364 | 99.65 | 99.50 | 84.84 | 95.62 | 83.41 | 94.00 | C P | C P | O |
Equus_caballus | equgene10st | 537520 | equgene10st_EQca_ENST | 83.3 | 24382 | 83.3 | 24380 | 100.00 | 100.00 | 99.99 | 100.00 | 99.99 | 100.00 | C P | C P | O |
Equus_caballus | equgene11st | 543179 | equgene11st_EQca_ENST | 82.4 | 24382 | 82.4 | 24380 | 100.00 | 100.00 | 99.99 | 100.00 | 99.99 | 100.00 | C P | C P | O |
Gallus_gallus | Chicken | 424097 | Chicken_Gg_ENST | 43.5 | 16547 | 43.5 | 16547 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Gallus_gallus | chigene10st | 464100 | chigene10st_Gg_ENST | 86.7 | 21654 | 86.7 | 21654 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Gallus_gallus | chigene11st | 464100 | chigene11st_Gg_ENST | 86.7 | 21654 | 86.7 | 21654 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_ENST | 79.1 | 6499 | 78.9 | 6188 | 99.76 | 100.00 | 94.43 | 99.18 | 94.17 | 98.90 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_ENST | 84.8 | 34877 | 84.7 | 33079 | 99.86 | 99.92 | 93.78 | 98.88 | 93.63 | 98.72 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_ENST | 77.1 | 60040 | 76.8 | 56701 | 99.52 | 99.92 | 93.63 | 99.14 | 93.29 | 98.78 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_ENST | 77.1 | 60040 | 76.8 | 56701 | 99.52 | 99.92 | 93.63 | 99.14 | 93.29 | 98.78 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_ENST | 48.7 | 28689 | 47.9 | 27030 | 98.06 | 99.79 | 93.39 | 99.12 | 93.08 | 98.80 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_ENST | 59.8 | 89083 | 59.0 | 83801 | 98.59 | 99.84 | 93.28 | 99.16 | 92.88 | 98.73 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_ENST | 84.9 | 97211 | 84.6 | 91815 | 99.59 | 99.91 | 93.70 | 99.20 | 93.35 | 98.84 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_ENST | 78.3 | 38510 | 78.1 | 36428 | 99.70 | 99.94 | 93.95 | 99.32 | 93.61 | 98.96 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_ENST | 78.3 | 38467 | 78.1 | 36387 | 99.70 | 99.94 | 93.95 | 99.32 | 93.61 | 98.96 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_ENST | 55.3 | 20597 | 54.8 | 19483 | 98.88 | 99.80 | 93.75 | 99.11 | 93.46 | 98.80 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_ENST | 40.1 | 15390 | 39.5 | 14618 | 98.24 | 99.80 | 93.50 | 98.44 | 93.23 | 98.15 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_ENST | 25.1 | 10323 | 24.5 | 9713 | 97.17 | 99.64 | 93.14 | 98.99 | 93.04 | 98.89 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_ENST | 40.7 | 16255 | 39.8 | 15254 | 97.57 | 99.88 | 92.94 | 99.04 | 92.64 | 98.72 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_ENST | 77.1 | 60040 | 76.8 | 56701 | 99.52 | 99.92 | 93.63 | 99.14 | 93.29 | 98.78 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_ENST | 48.7 | 28689 | 47.8 | 27030 | 98.06 | 99.79 | 93.39 | 99.12 | 93.08 | 98.80 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_ENST | 60.4 | 87458 | 59.7 | 82329 | 98.69 | 99.85 | 93.33 | 99.15 | 92.93 | 98.72 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_ENST | 77.5 | 25669 | 77.4 | 24314 | 99.77 | 100.00 | 94.21 | 99.46 | 93.99 | 99.23 | C P | C P | O |
Homo_sapiens | HuEx10stv2 | 5431924 | HuEx10stv2_Hs_ENST | 29.7 | 177475 | 29.2 | 164370 | 98.13 | 99.86 | 91.96 | 99.29 | 91.17 | 98.44 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_ENST | 0.5 | 457 | 0.5 | 439 | 94.32 | 99.07 | 95.62 | 99.54 | 95.62 | 99.54 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_ENST | 0.6 | 9794 | 0.6 | 9435 | 97.17 | 99.69 | 95.77 | 99.42 | 95.70 | 99.34 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_ENST | 0.9 | 13559 | 0.9 | 12903 | 96.55 | 99.71 | 94.52 | 99.33 | 94.40 | 99.20 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_ENST | 0.8 | 3456 | 0.8 | 3353 | 97.37 | 99.89 | 96.73 | 99.70 | 96.67 | 99.64 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_ENST | 0.6 | 2622 | 0.6 | 2537 | 97.22 | 99.75 | 96.41 | 99.65 | 96.38 | 99.61 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_ENST | 79.3 | 66007 | 78.5 | 62357 | 98.91 | 99.87 | 93.47 | 98.94 | 93.24 | 98.70 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_ENST | 87.6 | 97023 | 87.3 | 91643 | 99.60 | 99.91 | 93.70 | 99.20 | 93.36 | 98.84 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_ENST | 74.0 | 60058 | 73.7 | 56719 | 99.52 | 99.92 | 93.63 | 99.14 | 93.29 | 98.78 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_ENST | 58.1 | 81940 | 57.3 | 77290 | 98.49 | 99.81 | 93.46 | 99.08 | 93.10 | 98.70 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_ENST | 47.2 | 92893 | 46.4 | 87631 | 98.05 | 99.77 | 93.49 | 99.10 | 92.89 | 98.47 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_ENST | 34.8 | 23523 | 34.4 | 22295 | 98.82 | 99.89 | 94.21 | 99.39 | 93.98 | 99.16 | C P | C P | O |
Homo_sapiens | hta20 | 7577330 | hta20_Hs_ENST | 64.6 | 177474 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_ENST | 73.6 | 144533 | 73.1 | 134444 | 99.18 | 99.91 | 92.39 | 99.32 | 91.84 | 98.73 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_ENST | 72.2 | 144517 | 71.6 | 134429 | 99.18 | 99.91 | 92.39 | 99.32 | 91.84 | 98.73 | C P | C P | O |
Homo_sapiens | hugene20st | 1022045 | hugene20st_Hs_ENST | 54.4 | 152062 | 54.1 | 141911 | 99.08 | 99.68 | 92.61 | 99.23 | 92.03 | 98.62 | C P | C P | O |
Homo_sapiens | hugene21st | 1022045 | hugene21st_Hs_ENST | 54.4 | 152062 | 54.1 | 141911 | 99.08 | 99.68 | 92.61 | 99.23 | 92.03 | 98.62 | C P | C P | O |
Macaca_mulatta | Rhesus | 668485 | Rhesus_MAmu_ENST | 36.8 | 23864 | 36.8 | 23864 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Macaca_mulatta | rhegene10st | 810924 | rhegene10st_MAmu_ENST | 62.3 | 35825 | 62.3 | 35825 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Macaca_mulatta | rhegene11st | 810924 | rhegene11st_MAmu_ENST | 62.3 | 35825 | 62.3 | 35825 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_ENST | 77.8 | 30762 | 77.8 | 30680 | 99.95 | 99.93 | 99.62 | 99.89 | 99.59 | 99.86 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_ENST | 41.9 | 14606 | 41.9 | 14564 | 99.80 | 99.88 | 99.54 | 99.83 | 99.53 | 99.82 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_ENST | 59.0 | 41618 | 59.0 | 41493 | 99.90 | 99.91 | 99.57 | 99.87 | 99.54 | 99.84 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_ENST | 58.6 | 16639 | 58.7 | 16646 | 99.97 | 99.72 | 99.66 | 99.62 | 99.64 | 99.60 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_ENST | 67.2 | 18478 | 67.3 | 18484 | 99.97 | 99.74 | 99.69 | 99.66 | 99.68 | 99.64 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_ENST | 61.8 | 14201 | 61.8 | 14178 | 99.91 | 99.94 | 99.73 | 99.89 | 99.71 | 99.87 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_ENST | 28.1 | 6848 | 28.1 | 6824 | 99.86 | 99.99 | 99.59 | 99.94 | 99.59 | 99.94 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_ENST | 77.9 | 30762 | 77.9 | 30680 | 99.95 | 99.93 | 99.62 | 99.89 | 99.59 | 99.86 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_ENST | 42.0 | 14606 | 41.9 | 14564 | 99.80 | 99.88 | 99.54 | 99.83 | 99.53 | 99.82 | C P | C P | O |
Mus_musculus | MoEx10stv1 | 4779314 | MoEx10stv1_Mm_ENST | 26.2 | 76594 | 26.2 | 76394 | 99.79 | 99.85 | 99.39 | 99.65 | 99.33 | 99.59 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_ENST | 60.1 | 41618 | 60.1 | 41493 | 99.90 | 99.91 | 99.57 | 99.87 | 99.54 | 99.84 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_ENST | 77.9 | 30762 | 77.9 | 30680 | 99.95 | 99.93 | 99.62 | 99.89 | 99.59 | 99.86 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_ENST | 66.4 | 10004 | 66.5 | 9986 | 100.00 | 99.90 | 99.69 | 99.87 | 99.66 | 99.84 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_ENST | 53.6 | 7872 | 53.7 | 7862 | 99.95 | 99.86 | 99.62 | 99.75 | 99.61 | 99.73 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_ENST | 70.3 | 33820 | 70.4 | 33731 | 99.78 | 99.66 | 99.42 | 99.69 | 99.40 | 99.66 | C P | C P | O |
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_ENST | 55.1 | 35090 | 55.1 | 34979 | 99.75 | 99.85 | 99.50 | 99.81 | 99.49 | 99.80 | C P | C P | O |
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_ENST | 75.3 | 68575 | 75.3 | 68361 | 99.70 | 99.72 | 99.47 | 99.78 | 99.44 | 99.76 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_ENST | 74.3 | 68571 | 74.3 | 68357 | 99.70 | 99.72 | 99.47 | 99.78 | 99.44 | 99.76 | C P | C P | O |
Mus_musculus | mogene20st | 767405 | mogene20st_Mm_ENST | 65.2 | 70322 | C P | C P | O | ||||||||
Mus_musculus | mogene21st | 767405 | mogene21st_Mm_ENST | 65.2 | 70322 | C P | C P | O | ||||||||
Oryctolagus_cuniculus | Rabbit2a520535F | 226371 | Rabbit2a520535F_Oc_ENST | 63.7 | 17430 | 63.7 | 17430 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Rattus_norvegicus | HTRat230PM | 351132 | HTRat230PM_Rn_ENST | 40.5 | 12896 | 39.5 | 17001 | 88.58 | 90.65 | 89.05 | 67.55 | 76.41 | 57.96 | C P | C P | O |
Rattus_norvegicus | HTRatFocus | 266962 | HTRatFocus_Rn_ENST | 51.0 | 12533 | 50.4 | 16689 | 89.79 | 90.81 | 90.00 | 67.59 | 77.39 | 58.12 | C P | C P | O |
Rattus_norvegicus | RAE230A | 175477 | RAE230A_Rn_ENST | 54.8 | 9629 | 53.6 | 12693 | 89.32 | 91.29 | 89.32 | 67.76 | 78.86 | 59.82 | C P | C P | O |
Rattus_norvegicus | RAE230B | 168984 | RAE230B_Rn_ENST | 27.5 | 4369 | 26.8 | 5752 | 87.06 | 89.37 | 86.63 | 65.80 | 74.85 | 56.85 | C P | C P | O |
Rattus_norvegicus | RGU34A | 140317 | RGU34A_Rn_ENST | 58.1 | 5001 | 57.3 | 6574 | 90.25 | 91.63 | 89.42 | 68.03 | 75.28 | 57.27 | C P | C P | O |
Rattus_norvegicus | RGU34B | 140312 | RGU34B_Rn_ENST | 33.6 | 3277 | 32.3 | 4247 | 87.57 | 90.87 | 86.79 | 66.96 | 78.18 | 60.32 | C P | C P | O |
Rattus_norvegicus | RGU34C | 140284 | RGU34C_Rn_ENST | 36.6 | 3645 | 35.4 | 4722 | 87.73 | 90.74 | 87.57 | 67.60 | 78.19 | 60.36 | C P | C P | O |
Rattus_norvegicus | RNU34 | 21305 | RNU34_Rn_ENST | 68.7 | 906 | 70.3 | 1249 | 93.19 | 91.07 | 91.06 | 66.05 | 75.83 | 55.00 | C P | C P | O |
Rattus_norvegicus | RTU34 | 20464 | RTU34_Rn_ENST | 61.1 | 596 | 59.3 | 739 | 89.48 | 92.15 | 89.60 | 72.26 | 73.15 | 59.00 | C P | C P | O |
Rattus_norvegicus | RaEx10stv1 | 4108266 | RaEx10stv1_Rn_ENST | 21.1 | 23010 | 21.5 | 31785 | 90.71 | 88.91 | 91.05 | 65.91 | 54.97 | 39.79 | C P | C P | O |
Rattus_norvegicus | Rat2302 | 342410 | Rat2302_Rn_ENST | 41.5 | 12896 | 40.6 | 17001 | 88.58 | 90.65 | 89.05 | 67.55 | 76.41 | 57.96 | C P | C P | O |
Rattus_norvegicus | RatToxFX | 24535 | RatToxFX_Rn_ENST | 53.5 | 1433 | 53.2 | 1869 | 90.08 | 90.50 | 89.25 | 68.43 | 80.39 | 61.64 | C P | C P | O |
Rattus_norvegicus | ragene10st | 777760 | ragene10st_Rn_ENST | 66.3 | 22560 | 71.6 | 32037 | 92.32 | 85.45 | 92.40 | 65.07 | 64.37 | 45.33 | C P | C P | O |
Rattus_norvegicus | ragene11st | 788189 | ragene11st_Rn_ENST | 65.4 | 22560 | 70.6 | 32034 | 92.31 | 85.43 | 92.40 | 65.07 | 64.37 | 45.33 | C P | C P | O |
Rattus_norvegicus | ragene20st | 675529 | ragene20st_Rn_ENST | 60.5 | 22478 | C P | C P | O | ||||||||
Rattus_norvegicus | ragene21st | 675529 | ragene21st_Rn_ENST | 60.5 | 22478 | C P | C P | O | ||||||||
Saccharomyces_cerevisiae | YGS98 | 138412 | YGS98_Sc_ENST | 74.3 | 6090 | 74.3 | 6090 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Saccharomyces_cerevisiae | Yeast2 | 120855 | Yeast2_Sc_ENST | 51.3 | 5603 | 51.3 | 5603 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | 100.00 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_ENST | 39.8 | 10248 | 39.0 | 8826 | 97.43 | 99.52 | 85.89 | 99.73 | 85.14 | 98.86 | C P | C P | O |
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_ENST | 35.3 | 20878 | 34.2 | 17475 | 96.83 | 99.81 | 83.68 | 99.97 | 82.31 | 98.33 | C P | C P | O |
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_ENST | 63.2 | 22830 | 62.7 | 19489 | 99.10 | 99.93 | 85.34 | 99.97 | 84.30 | 98.75 | C P | C P | O |
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_ENST | 63.2 | 22830 | 62.7 | 19489 | 99.10 | 99.93 | 85.34 | 99.97 | 84.30 | 98.75 | C P | C P | O |