Species | Chip | Original Probe Count | Custom CDF Name | Statistics of Current Version |
Statistics of Previous Version |
% of Common Probes in Version |
% of Common Probesets in Version |
% of Identical Probesets in Version |
R Packages | CDF Seq Map Desc | ||||||
Probe % | Probeset # | Probe % | Probeset # | Current | Previous | Current | Previous | Current | Previous | Source | Win32 | |||||
Danio_rerio | Zebrafish | 249752 | Zebrafish_Dr_VEGAG | 44.6 | 6742 | 43.4 | 6546 | 96.91 | 99.80 | 96.89 | 99.79 | 96.44 | 99.33 | C P | C P | O |
Danio_rerio | zebgene10st | 1245559 | zebgene10st_Dr_VEGAG | 32.6 | 16923 | 31.3 | 16309 | 95.84 | 99.80 | 95.97 | 99.58 | 93.39 | 96.90 | C P | C P | O |
Danio_rerio | zebgene11st | 1245558 | zebgene11st_Dr_VEGAG | 32.6 | 16923 | 31.3 | 16309 | 95.84 | 99.80 | 95.97 | 99.58 | 93.39 | 96.90 | C P | C P | O |
Homo_sapiens | HCG110 | 30313 | HCG110_Hs_VEGAG | 70.5 | 1251 | 70.4 | 1253 | 99.61 | 99.78 | 99.68 | 99.52 | 98.96 | 98.80 | C P | C P | O |
Homo_sapiens | HGFocus | 98149 | HGFocus_Hs_VEGAG | 76.7 | 7587 | 76.5 | 7571 | 99.18 | 99.54 | 99.21 | 99.42 | 98.59 | 98.80 | C P | C P | O |
Homo_sapiens | HGU133A | 247965 | HGU133A_Hs_VEGAG | 70.2 | 11873 | 69.8 | 11861 | 98.82 | 99.35 | 99.12 | 99.22 | 97.67 | 97.77 | C P | C P | O |
Homo_sapiens | HGU133A2 | 247899 | HGU133A2_Hs_VEGAG | 70.2 | 11873 | 69.9 | 11861 | 98.82 | 99.35 | 99.12 | 99.22 | 97.67 | 97.77 | C P | C P | O |
Homo_sapiens | HGU133B | 249502 | HGU133B_Hs_VEGAG | 50.0 | 8906 | 47.4 | 8582 | 93.44 | 98.60 | 94.58 | 98.15 | 91.31 | 94.76 | C P | C P | O |
Homo_sapiens | HGU133Plus2 | 604258 | HGU133Plus2_Hs_VEGAG | 58.5 | 19890 | 57.2 | 19759 | 96.61 | 98.70 | 97.60 | 98.25 | 93.90 | 94.52 | C P | C P | O |
Homo_sapiens | HGU219 | 548517 | HGU219_Hs_VEGAG | 76.7 | 17697 | 76.0 | 17674 | 98.56 | 99.34 | 99.11 | 99.24 | 96.55 | 96.67 | C P | C P | O |
Homo_sapiens | HGU95A | 201807 | HGU95A_Hs_VEGAG | 72.0 | 8172 | 71.5 | 8151 | 98.76 | 99.47 | 99.12 | 99.37 | 97.49 | 97.74 | C P | C P | O |
Homo_sapiens | HGU95Av2 | 201800 | HGU95Av2_Hs_VEGAG | 72.0 | 8172 | 71.5 | 8151 | 98.76 | 99.47 | 99.12 | 99.37 | 97.49 | 97.74 | C P | C P | O |
Homo_sapiens | HGU95B | 201862 | HGU95B_Hs_VEGAG | 55.7 | 6062 | 53.3 | 5867 | 94.52 | 98.72 | 95.20 | 98.36 | 92.99 | 96.08 | C P | C P | O |
Homo_sapiens | HGU95C | 201867 | HGU95C_Hs_VEGAG | 41.6 | 4814 | 39.7 | 4644 | 93.95 | 98.58 | 94.56 | 98.02 | 92.48 | 95.87 | C P | C P | O |
Homo_sapiens | HGU95D | 201858 | HGU95D_Hs_VEGAG | 27.5 | 3571 | 25.8 | 3388 | 92.19 | 98.06 | 92.64 | 97.64 | 90.70 | 95.60 | C P | C P | O |
Homo_sapiens | HGU95E | 201863 | HGU95E_Hs_VEGAG | 41.0 | 4717 | 39.2 | 4562 | 94.33 | 98.57 | 95.08 | 98.31 | 92.98 | 96.14 | C P | C P | O |
Homo_sapiens | HTHGU133A | 247899 | HTHGU133A_Hs_VEGAG | 70.2 | 11873 | 69.9 | 11861 | 98.82 | 99.35 | 99.12 | 99.22 | 97.67 | 97.77 | C P | C P | O |
Homo_sapiens | HTHGU133B | 249803 | HTHGU133B_Hs_VEGAG | 50.0 | 8906 | 47.3 | 8582 | 93.44 | 98.60 | 94.58 | 98.15 | 91.31 | 94.76 | C P | C P | O |
Homo_sapiens | HTHGU133PlusPM | 528052 | HTHGU133PlusPM_Hs_VEGAG | 58.8 | 19782 | 57.6 | 19654 | 96.78 | 98.75 | 97.61 | 98.24 | 93.97 | 94.58 | C P | C P | O |
Homo_sapiens | Hu6800 | 131541 | Hu6800_Hs_VEGAG | 70.6 | 5018 | 70.4 | 5018 | 99.27 | 99.44 | 99.40 | 99.40 | 98.37 | 98.37 | C P | C P | O |
Homo_sapiens | Mapping10KXba142 | 213380 | Mapping10KXba142_Hs_VEGAG | 1.1 | 223 | 1.1 | 216 | 95.81 | 98.76 | 95.07 | 98.15 | 94.17 | 97.22 | C P | C P | O |
Homo_sapiens | Mapping250KNsp | 3236396 | Mapping250KNsp_Hs_VEGAG | 1.5 | 5056 | 1.4 | 4941 | 93.62 | 97.22 | 94.96 | 97.17 | 92.64 | 94.80 | C P | C P | O |
Homo_sapiens | Mapping250KSty | 3236180 | Mapping250KSty_Hs_VEGAG | 2.0 | 6066 | 1.9 | 5921 | 94.29 | 97.10 | 94.79 | 97.11 | 92.85 | 95.12 | C P | C P | O |
Homo_sapiens | Mapping50KHind240 | 1144880 | Mapping50KHind240_Hs_VEGAG | 1.7 | 1570 | 1.6 | 1517 | 93.39 | 97.91 | 94.14 | 97.43 | 92.93 | 96.18 | C P | C P | O |
Homo_sapiens | Mapping50KXba240 | 1179200 | Mapping50KXba240_Hs_VEGAG | 1.4 | 1326 | 1.3 | 1267 | 92.39 | 97.94 | 93.44 | 97.79 | 92.01 | 96.29 | C P | C P | O |
Homo_sapiens | NuGOHs1a520180 | 265687 | NuGOHs1a520180_Hs_VEGAG | 73.1 | 17394 | 72.3 | 17285 | 98.08 | 99.20 | 98.48 | 99.10 | 97.34 | 97.95 | C P | C P | O |
Homo_sapiens | PrimeView | 501271 | PrimeView_Hs_VEGAG | 79.2 | 17678 | 78.5 | 17655 | 98.52 | 99.35 | 99.12 | 99.25 | 96.56 | 96.68 | C P | C P | O |
Homo_sapiens | U133AAofAv2 | 259234 | U133AAofAv2_Hs_VEGAG | 67.4 | 11873 | 67.1 | 11861 | 98.82 | 99.35 | 99.12 | 99.22 | 97.67 | 97.77 | C P | C P | O |
Homo_sapiens | U133X3P | 673904 | U133X3P_Hs_VEGAG | 57.3 | 19775 | 56.1 | 19642 | 96.62 | 98.69 | 97.58 | 98.24 | 94.16 | 94.80 | C P | C P | O |
Homo_sapiens | Xcel | 1324676 | Xcel_Hs_VEGAG | 46.8 | 22702 | 45.5 | 22452 | 95.76 | 98.47 | 96.70 | 97.77 | 91.67 | 92.70 | C P | C P | O |
Homo_sapiens | gnGNF1Ba | 250925 | gnGNF1Ba_Hs_VEGAG | 31.1 | 5795 | 30.9 | 5767 | 98.48 | 99.09 | 98.55 | 99.03 | 97.43 | 97.90 | C P | C P | O |
Homo_sapiens | hta20 | 6745406 | hta20_Hs_VEGAG | 57.8 | 31717 | 57.8 | 32119 | 98.72 | 98.72 | 98.13 | 96.90 | 90.97 | 89.83 | C P | C P | O |
Homo_sapiens | huex10st | 5432522 | huex10st_Hs_VEGAG | 29.6 | 36400 | C P | C P | O | ||||||||
Homo_sapiens | hugene10st | 788904 | hugene10st_Hs_VEGAG | 69.8 | 19304 | 69.5 | 19279 | 98.99 | 99.31 | 99.08 | 99.21 | 95.83 | 95.95 | C P | C P | O |
Homo_sapiens | hugene11st | 803478 | hugene11st_Hs_VEGAG | 68.4 | 19299 | 68.2 | 19274 | 98.99 | 99.31 | 99.08 | 99.21 | 95.84 | 95.96 | C P | C P | O |
Homo_sapiens | hugene20st | 965365 | hugene20st_Hs_VEGAG | 63.3 | 28767 | 63.5 | 28965 | 98.61 | 98.27 | 98.59 | 97.91 | 93.26 | 92.62 | C P | C P | O |
Homo_sapiens | hugene21st | 965365 | hugene21st_Hs_VEGAG | 63.3 | 28767 | 63.5 | 28965 | 98.61 | 98.27 | 98.59 | 97.91 | 93.26 | 92.62 | C P | C P | O |
Mus_musculus | HTMG430A | 250325 | HTMG430A_Mm_VEGAG | 51.9 | 8557 | 51.2 | 8436 | 98.38 | 99.74 | 98.39 | 99.80 | 97.42 | 98.81 | C P | C P | O |
Mus_musculus | HTMG430B | 249071 | HTMG430B_Mm_VEGAG | 31.2 | 5502 | 30.3 | 5366 | 96.63 | 99.59 | 96.95 | 99.40 | 96.24 | 98.68 | C P | C P | O |
Mus_musculus | HTMG430PM | 505190 | HTMG430PM_Mm_VEGAG | 41.1 | 12105 | 40.2 | 11896 | 97.73 | 99.69 | 97.90 | 99.62 | 96.78 | 98.48 | C P | C P | O |
Mus_musculus | MGU74A | 201964 | MGU74A_Mm_VEGAG | 38.5 | 4979 | 38.1 | 4915 | 98.45 | 99.69 | 98.49 | 99.78 | 96.99 | 98.25 | C P | C P | O |
Mus_musculus | MGU74Av2 | 197993 | MGU74Av2_Mm_VEGAG | 44.3 | 5497 | 43.7 | 5425 | 98.39 | 99.72 | 98.49 | 99.80 | 97.11 | 98.40 | C P | C P | O |
Mus_musculus | MGU74Bv2 | 197131 | MGU74Bv2_Mm_VEGAG | 43.4 | 4666 | 42.6 | 4583 | 97.76 | 99.74 | 97.99 | 99.76 | 97.13 | 98.89 | C P | C P | O |
Mus_musculus | MGU74Cv2 | 182797 | MGU74Cv2_Mm_VEGAG | 21.1 | 2734 | 20.5 | 2658 | 96.56 | 99.56 | 96.89 | 99.66 | 95.68 | 98.42 | C P | C P | O |
Mus_musculus | MOE430A | 249958 | MOE430A_Mm_VEGAG | 52.0 | 8557 | 51.3 | 8436 | 98.38 | 99.74 | 98.39 | 99.80 | 97.42 | 98.81 | C P | C P | O |
Mus_musculus | MOE430B | 248704 | MOE430B_Mm_VEGAG | 31.3 | 5502 | 30.3 | 5366 | 96.63 | 99.59 | 96.95 | 99.40 | 96.24 | 98.68 | C P | C P | O |
Mus_musculus | Mouse4302 | 496468 | Mouse4302_Mm_VEGAG | 41.8 | 12105 | 41.0 | 11896 | 97.73 | 99.69 | 97.90 | 99.62 | 96.78 | 98.48 | C P | C P | O |
Mus_musculus | Mouse430A2 | 249958 | Mouse430A2_Mm_VEGAG | 52.0 | 8557 | 51.3 | 8436 | 98.38 | 99.74 | 98.39 | 99.80 | 97.42 | 98.81 | C P | C P | O |
Mus_musculus | Mu11KsubA | 131280 | Mu11KsubA_Mm_VEGAG | 44.6 | 3104 | 44.1 | 3063 | 98.29 | 99.60 | 98.36 | 99.67 | 96.13 | 97.42 | C P | C P | O |
Mus_musculus | Mu11KsubB | 119580 | Mu11KsubB_Mm_VEGAG | 33.1 | 1990 | 32.7 | 1962 | 98.41 | 99.69 | 98.34 | 99.75 | 95.88 | 97.25 | C P | C P | O |
Mus_musculus | NuGOMm1a520177 | 262909 | NuGOMm1a520177_Mm_VEGAG | 46.8 | 11583 | 46.0 | 11404 | 98.04 | 99.78 | 98.21 | 99.75 | 97.76 | 99.30 | C P | C P | O |
Mus_musculus | chogene20st | 667089 | chogene20st_Mm_VEGAG | 9.1 | 8233 | C P | C P | O | ||||||||
Mus_musculus | chogene21st | 667089 | chogene21st_Mm_VEGAG | 9.1 | 8233 | C P | C P | O | ||||||||
Mus_musculus | gnGNF1Musa | 362266 | gnGNF1Musa_Mm_VEGAG | 39.7 | 12148 | 38.9 | 11942 | 97.52 | 99.61 | 97.93 | 99.62 | 96.90 | 98.58 | C P | C P | O |
Mus_musculus | moex10st | 4779548 | moex10st_Mm_VEGAG | 19.9 | 19119 | C P | C P | O | ||||||||
Mus_musculus | mogene10st | 819132 | mogene10st_Mm_VEGAG | 52.2 | 14703 | 50.9 | 14388 | 97.45 | 99.82 | 97.67 | 99.81 | 97.16 | 99.28 | C P | C P | O |
Mus_musculus | mogene11st | 828268 | mogene11st_Mm_VEGAG | 51.4 | 14703 | 50.2 | 14388 | 97.44 | 99.82 | 97.67 | 99.81 | 97.16 | 99.28 | C P | C P | O |
Mus_musculus | mogene20st | 740483 | mogene20st_Mm_VEGAG | 50.6 | 17127 | 49.6 | 16806 | 97.79 | 99.72 | 97.83 | 99.70 | 97.06 | 98.92 | C P | C P | O |
Mus_musculus | mogene21st | 740484 | mogene21st_Mm_VEGAG | 50.6 | 17127 | 49.6 | 16806 | 97.79 | 99.72 | 97.83 | 99.70 | 97.06 | 98.92 | C P | C P | O |
Sus_scrofa | Porcine | 265635 | Porcine_Ss_VEGAG | 4.7 | 934 | C P | C P | O | ||||||||
Sus_scrofa | SNOWBALLs520824F | 1093229 | SNOWBALLs520824F_Ss_VEGAG | 4.4 | 1646 | C P | C P | O | ||||||||
Sus_scrofa | porgene10st | 595966 | porgene10st_Ss_VEGAG | 6.2 | 1617 | C P | C P | O | ||||||||
Sus_scrofa | porgene11st | 595966 | porgene11st_Ss_VEGAG | 6.2 | 1617 | C P | C P | O |