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Download Custom CDF (version 8)

We want to apologize that we mixed different genome assembly in creating ENTREZ custom CDFs. After investigation, we found that the mixture of difference assembly make the dog and zebra fish ENTREZ Gene CDF useless but has relative minor impact on ENTREZ Gene CDFs for other species. The summaries are in table 1-3 in the spreadsheet.

This problem will be corrected in the next release of custom CDF in March, 2007.

Human     Chimpanzee    Mouse        Rat    Arabidopsis    Dog    Fruitfly    Zebrafish    Chicken    Rice    Grape

Application File Type to Download
Linux/MacOS 10 R Packages Source Package, Source Annotation
Windows R Packages Win32 Package, Win32 Annotation
Non-R Program under Windows CDF,Seq,Map,Description
Species Chip Type CDF File Type CDF File Name Source CDF Win32 CDF Source Probe Win32 Probe Source Annotation Win32 Annotation CDF&Map&Group Best Accession
Arabidopsis thaliana AtGenome AFFY NA NA NA NA NA NA NA NA Acc
Arabidopsis thaliana AtGenome REFSEQ AtGenome_At_REFSEQ_8 Source Cdf Win32 Cdf Source Probe Win32 Probe Source Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Arabidopsis thaliana AtGenome TAIR AtGenome_At_TAIR_8 Source Cdf Win32 Cdf Source Probe Win32 Probe Source Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Arabidopsis thaliana AtGenome TIGR AtGenome_At_TIGR_8 Source Cdf Win32 Cdf Source Probe Win32 Probe Source Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Arabidopsis thaliana AtH1 AFFY NA NA NA NA NA NA NA NA Acc
Arabidopsis thaliana AtH1 REFSEQ AtH1_At_REFSEQ_8 Source Cdf Win32 Cdf Source Probe Win32 Probe Source Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Arabidopsis thaliana AtH1 TAIR AtH1_At_TAIR_8 Source Cdf Win32 Cdf Source Probe Win32 Probe Source Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Arabidopsis thaliana AtH1 TIGR AtH1_At_TIGR_8 Source Cdf Win32 Cdf Source Probe Win32 Probe Source Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Canis familiaris CfCanine2 AFFY NA NA NA NA NA NA NA NA Acc
Canis familiaris CfCanine2 ENSE CfCanine2_Cf_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Canis familiaris CfCanine2 ENSG CfCanine2_Cf_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Canis familiaris CfCanine2 ENST CfCanine2_Cf_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Canis familiaris CfCanine2 ENTREZG CfCanine2_Cf_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Canis familiaris CfCanine2 REFSEQ CfCanine2_Cf_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Canis familiaris CfCanine2 UG CfCanine2_Cf_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmDrosophila2 AFFY NA NA NA NA NA NA NA NA Acc
Drosophila melanogaster DmDrosophila2 ENSE DmDrosophila2_Dm_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Drosophila melanogaster DmDrosophila2 ENSG DmDrosophila2_Dm_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmDrosophila2 ENST DmDrosophila2_Dm_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmDrosophila2 REFSEQ DmDrosophila2_Dm_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmDrosophila2 UG DmDrosophila2_Dm_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmGenome1 AFFY NA NA NA NA NA NA NA NA Acc
Drosophila melanogaster DmGenome1 ENSE DmGenome1_Dm_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Drosophila melanogaster DmGenome1 ENSG DmGenome1_Dm_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmGenome1 ENST DmGenome1_Dm_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmGenome1 REFSEQ DmGenome1_Dm_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Drosophila melanogaster DmGenome1 UG DmGenome1_Dm_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Danio rerio DrZebrafish AFFY NA NA NA NA NA NA NA NA Acc
Danio rerio DrZebrafish ENSE DrZebrafish_Dr_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Danio rerio DrZebrafish ENSG DrZebrafish_Dr_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Danio rerio DrZebrafish ENST DrZebrafish_Dr_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Danio rerio DrZebrafish ENTREZG DrZebrafish_Dr_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Danio rerio DrZebrafish REFSEQ DrZebrafish_Dr_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Danio rerio DrZebrafish UG DrZebrafish_Dr_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Gallus gallus GgChicken AFFY NA NA NA NA NA NA NA NA Acc
Gallus gallus GgChicken ENSE GgChicken_Gg_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Gallus gallus GgChicken ENSG GgChicken_Gg_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Gallus gallus GgChicken ENST GgChicken_Gg_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Gallus gallus GgChicken REFSEQ GgChicken_Gg_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Gallus gallus GgChicken UG GgChicken_Gg_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133A AFFY NA NA NA NA NA NA NA NA Acc
Homo sapiens Hs133A ENSE Hs133A_Hs_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Homo sapiens Hs133A ENSG Hs133A_Hs_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133A ENST Hs133A_Hs_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133A ENTREZG Hs133A_Hs_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133A REFSEQ Hs133A_Hs_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133A UG Hs133A_Hs_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133Av2 AFFY NA NA NA NA NA NA NA NA Acc
Homo sapiens Hs133Av2 ENSE Hs133Av2_Hs_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Homo sapiens Hs133Av2 ENSG Hs133Av2_Hs_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133Av2 ENST Hs133Av2_Hs_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133Av2 ENTREZG Hs133Av2_Hs_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133Av2 REFSEQ Hs133Av2_Hs_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133Av2 UG Hs133Av2_Hs_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133B AFFY NA NA NA NA NA NA NA NA Acc
Homo sapiens Hs133B ENSE Hs133B_Hs_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Homo sapiens Hs133B ENSG Hs133B_Hs_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133B ENST Hs133B_Hs_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133B ENTREZG Hs133B_Hs_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133B REFSEQ Hs133B_Hs_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133B UG Hs133B_Hs_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133P AFFY NA NA NA NA NA NA NA NA Acc
Homo sapiens Hs133P ENSE Hs133P_Hs_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Homo sapiens Hs133P ENSG Hs133P_Hs_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133P ENST Hs133P_Hs_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133P ENTREZG Hs133P_Hs_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133P REFSEQ Hs133P_Hs_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133P UG Hs133P_Hs_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133X AFFY NA NA NA NA NA NA NA NA Acc
Homo sapiens Hs133X ENSE Hs133X_Hs_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Homo sapiens Hs133X ENSG Hs133X_Hs_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133X ENST Hs133X_Hs_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133X ENTREZG Hs133X_Hs_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133X REFSEQ Hs133X_Hs_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs133X UG Hs133X_Hs_UG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs95Av2 AFFY NA NA NA NA NA NA NA NA Acc
Homo sapiens Hs95Av2 ENSE Hs95Av2_Hs_ENSE_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc NA
Homo sapiens Hs95Av2 ENSG Hs95Av2_Hs_ENSG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs95Av2 ENST Hs95Av2_Hs_ENST_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs95Av2 ENTREZG Hs95Av2_Hs_ENTREZG_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation Cdf&Seq&Map&Desc Acc
Homo sapiens Hs95Av2 REFSEQ Hs95Av2_Hs_REFSEQ_8 Soure Cdf Win32 Cdf Soure Probe Win32 Probe Soure Annotation Win32 Annotation